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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12421 O_BomoEE2117_complete:A_BomoEE_comp33515_c0_seq1
263bp
 PREDICTED:_elongation_factor_1_delta_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003746 F translation elongation factor activity
GO:0004871 F obsolete signal transducer activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0007165 P signal transduction
GO:0009299 P mRNA transcription
GO:0010941 P regulation of cell death
GO:0031072 F heat shock protein binding
GO:0033613 F DNA-binding transcription factor binding
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0071479 P cellular response to ionizing radiation
12422 O_BomoEE21180_complete:A_BomoEE_comp70115_c0_seq8
146bp
12423 O_BomoEE21181_complete:A_BomoEE_comp70115_c0_seq9
536bp
 PREDICTED:_uncharacterized_protein_C4orf29_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0008150 P biological_process
12424 O_BomoEE21182_complete:A_BomoEE_comp70115_c0_seq9
146bp
12425 O_BomoEE21183_3prime_partial:A_BomoEE_comp70116_c0_seq1
987bp
 parp_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003950 F NAD+ ADP-ribosyltransferase activity
GO:0005634 C nucleus
GO:0006471 P protein ADP-ribosylation
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
12426 O_BomoEE21184_5prime_partial:A_BomoEE_comp70116_c0_seq1
124bp
 hypothetical_protein_ALC53_04936_[Atta_colombica]
12427 O_BomoEE21185_complete:A_BomoEE_comp70116_c0_seq1
113bp
12428 O_BomoEE21186_complete:A_BomoEE_comp70116_c0_seq2
1000bp
 parp_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003950 F NAD+ ADP-ribosyltransferase activity
GO:0005634 C nucleus
GO:0006471 P protein ADP-ribosylation
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
12429 O_BomoEE21187_complete:A_BomoEE_comp70116_c0_seq2
113bp
12430 O_BomoEE21188_5prime_partial:A_BomoEE_comp70119_c0_seq1
184bp
12431 O_BomoEE21189_3prime_partial:A_BomoEE_comp70119_c0_seq1
179bp
 PREDICTED:_uncharacterized_protein_LOC105841508_[Bombyx_mori]
12432 O_BomoEE2118_complete:A_BomoEE_comp33515_c0_seq2
234bp
 PREDICTED:_elongation_factor_1_delta_isoform_X2_[Bombyx_mori]
GO:0003746 F translation elongation factor activity
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
12433 O_BomoEE21190_complete:A_BomoEE_comp70120_c0_seq1
395bp
 PREDICTED:_ankyrin_repeat_and_MYND_domain-containing_protein_2_[Amyelois_transitella]
GO:0005929 C cilium
GO:0042995 C cell projection
GO:0046872 F metal ion binding
12434 O_BomoEE21191_complete:A_BomoEE_comp70120_c0_seq1
368bp
 PREDICTED:_T-box_transcription_factor_TBX6-like_[Papilio_xuthus]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
12435 O_BomoEE21192_complete:A_BomoEE_comp70121_c0_seq1
217bp
 PREDICTED:_uncharacterized_protein_LOC105392658_[Plutella_xylostella]
12436 O_BomoEE21193_complete:A_BomoEE_comp70122_c0_seq1
206bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
12437 O_BomoEE21194_complete:A_BomoEE_comp70122_c0_seq2
312bp
 PREDICTED:_putative_RNA-binding_protein_Luc7-like_2_isoform_X2_[Papilio_xuthus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
12438 O_BomoEE21195_complete:A_BomoEE_comp70122_c0_seq3
353bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
12439 O_BomoEE21196_complete:A_BomoEE_comp70122_c0_seq4
300bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
12440 O_BomoEE21197_complete:A_BomoEE_comp70122_c0_seq5
300bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
12441 O_BomoEE21198_complete:A_BomoEE_comp70122_c0_seq6
300bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
12442 O_BomoEE21199_complete:A_BomoEE_comp70122_c0_seq7
300bp
 putative_splicing_factor_pTSR1_[Danaus_plexippus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
12443 O_BomoEE2119_complete:A_BomoEE_comp33515_c1_seq1
188bp
 ADP-ribosylation_factor-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000819 P sister chromatid segregation
GO:0001666 P response to hypoxia
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019003 F GDP binding
GO:0030496 C midbody
GO:0032419 C extrinsic component of lysosome membrane
GO:0043014 F alpha-tubulin binding
GO:0048487 F beta-tubulin binding
GO:0051233 C spindle midzone
GO:0051301 P cell division
12444 O_BomoEE211_3prime_partial:A_BomoEE_comp3202_c0_seq1
125bp
 PREDICTED:_uncharacterized_protein_LOC105842449_[Bombyx_mori]
12445 O_BomoEE21200_complete:A_BomoEE_comp70125_c0_seq2
429bp
 alpha-N-acetylgalactosaminidase_precursor_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004557 F alpha-galactosidase activity
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0008456 F alpha-N-acetylgalactosaminidase activity
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
12446 O_BomoEE21201_5prime_partial:A_BomoEE_comp70126_c0_seq2
392bp
 PREDICTED:_uncharacterized_protein_LOC101736599_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
12447 O_BomoEE21202_complete:A_BomoEE_comp70126_c0_seq2
187bp
12448 O_BomoEE21203_3prime_partial:A_BomoEE_comp70126_c0_seq2
177bp
12449 O_BomoEE21204_complete:A_BomoEE_comp70126_c0_seq2
107bp
12450 O_BomoEE21205_5prime_partial:A_BomoEE_comp70127_c0_seq1
748bp
 PREDICTED:_zinc_finger_protein_708-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0042035 P regulation of cytokine production
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
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