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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12241 O_BomoEE21017_complete:A_BomoEE_comp70102_c0_seq14
223bp
12242 O_BomoEE21018_complete:A_BomoEE_comp70102_c0_seq14
213bp
12243 O_BomoEE21019_complete:A_BomoEE_comp70102_c0_seq14
185bp
12244 O_BomoEE2101_5prime_partial:A_BomoEE_comp33496_c0_seq1
1035bp
 PREDICTED:_E3_ubiquitin-protein_ligase_TRIP12_isoform_X2_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009790 P embryo development
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046966 F thyroid hormone receptor binding
GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination
GO:2000780 P negative regulation of double-strand break repair
12245 O_BomoEE21020_complete:A_BomoEE_comp70102_c0_seq14
118bp
12246 O_BomoEE21021_5prime_partial:A_BomoEE_comp70102_c0_seq14
107bp
12247 O_BomoEE21022_5prime_partial:A_BomoEE_comp70102_c0_seq15
1516bp
 PREDICTED:_dystonin-like_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
12248 O_BomoEE21023_complete:A_BomoEE_comp70102_c0_seq15
392bp
12249 O_BomoEE21024_complete:A_BomoEE_comp70102_c0_seq15
223bp
12250 O_BomoEE21025_complete:A_BomoEE_comp70102_c0_seq15
185bp
12251 O_BomoEE21026_complete:A_BomoEE_comp70102_c0_seq15
118bp
12252 O_BomoEE21027_complete:A_BomoEE_comp70102_c0_seq15
111bp
12253 O_BomoEE21028_5prime_partial:A_BomoEE_comp70102_c0_seq15
107bp
12254 O_BomoEE21029_5prime_partial:A_BomoEE_comp70102_c0_seq16
484bp
 PREDICTED:_uncharacterized_protein_LOC106119215_[Papilio_xuthus]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
12255 O_BomoEE2102_5prime_partial:A_BomoEE_comp33496_c0_seq1
182bp
12256 O_BomoEE21030_complete:A_BomoEE_comp70102_c0_seq16
111bp
12257 O_BomoEE21031_5prime_partial:A_BomoEE_comp70102_c0_seq16
100bp
12258 O_BomoEE21032_5prime_partial:A_BomoEE_comp70102_c0_seq17
1510bp
 PREDICTED:_dystonin-like_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
12259 O_BomoEE21033_complete:A_BomoEE_comp70102_c0_seq17
392bp
12260 O_BomoEE21034_complete:A_BomoEE_comp70102_c0_seq17
223bp
12261 O_BomoEE21035_complete:A_BomoEE_comp70102_c0_seq17
213bp
12262 O_BomoEE21036_complete:A_BomoEE_comp70102_c0_seq17
185bp
12263 O_BomoEE21037_complete:A_BomoEE_comp70102_c0_seq17
118bp
12264 O_BomoEE21038_5prime_partial:A_BomoEE_comp70102_c0_seq17
107bp
12265 O_BomoEE21039_5prime_partial:A_BomoEE_comp70102_c0_seq18
1504bp
 PREDICTED:_dystonin-like_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
12266 O_BomoEE2103_complete:A_BomoEE_comp33496_c0_seq1
176bp
12267 O_BomoEE21040_complete:A_BomoEE_comp70102_c0_seq18
392bp
12268 O_BomoEE21041_complete:A_BomoEE_comp70102_c0_seq18
223bp
12269 O_BomoEE21042_complete:A_BomoEE_comp70102_c0_seq18
185bp
12270 O_BomoEE21043_complete:A_BomoEE_comp70102_c0_seq18
118bp
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