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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11851 O_BomoEE20667_3prime_partial:A_BomoEE_comp70054_c0_seq9
136bp
11852 O_BomoEE20668_complete:A_BomoEE_comp70054_c0_seq9
110bp
11853 O_BomoEE20669_complete:A_BomoEE_comp70055_c0_seq1
645bp
 PREDICTED:_uncharacterized_protein_LOC101735428_isoform_X2_[Bombyx_mori]
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0035497 F cAMP response element binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
11854 O_BomoEE2066_complete:A_BomoEE_comp33439_c0_seq1
243bp
 PREDICTED:_serine/arginine-rich_splicing_factor_1A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
11855 O_BomoEE20670_complete:A_BomoEE_comp70055_c0_seq1
133bp
11856 O_BomoEE20671_complete:A_BomoEE_comp70055_c0_seq2
649bp
 PREDICTED:_uncharacterized_protein_LOC101735428_isoform_X2_[Bombyx_mori]
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0035497 F cAMP response element binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
11857 O_BomoEE20672_complete:A_BomoEE_comp70055_c0_seq2
133bp
11858 O_BomoEE20673_complete:A_BomoEE_comp70055_c0_seq3
497bp
 PREDICTED:_cyclic_AMP-responsive_element-binding_protein_3-like_protein_3-B_isoform_X3_[Bombyx_mori]
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0035497 F cAMP response element binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
11859 O_BomoEE20674_complete:A_BomoEE_comp70055_c0_seq4
501bp
 PREDICTED:_cyclic_AMP-responsive_element-binding_protein_3-like_protein_3-B_isoform_X3_[Bombyx_mori]
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0002675 P positive regulation of acute inflammatory response
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0035497 F cAMP response element binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
11860 O_BomoEE20675_complete:A_BomoEE_comp70056_c0_seq1
355bp
 PREDICTED:_protein_RRNAD1-like_[Bombyx_mori]
GO:0000154 P rRNA modification
GO:0000179 F rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031167 P rRNA methylation
GO:0032259 P methylation
11861 O_BomoEE20676_complete:A_BomoEE_comp70056_c0_seq1
120bp
 PREDICTED:_protein_RRNAD1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11862 O_BomoEE20677_complete:A_BomoEE_comp70056_c0_seq2
120bp
 PREDICTED:_protein_RRNAD1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11863 O_BomoEE20678_complete:A_BomoEE_comp70056_c0_seq3
248bp
 PREDICTED:_protein_RRNAD1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11864 O_BomoEE20679_complete:A_BomoEE_comp70056_c0_seq3
192bp
 PREDICTED:_protein_RRNAD1-like_[Bombyx_mori]
GO:0000154 P rRNA modification
GO:0000179 F rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031167 P rRNA methylation
GO:0032259 P methylation
11865 O_BomoEE2067_complete:A_BomoEE_comp33439_c0_seq1
100bp
11866 O_BomoEE20680_complete:A_BomoEE_comp70056_c0_seq4
477bp
 PREDICTED:_protein_RRNAD1-like_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11867 O_BomoEE20681_complete:A_BomoEE_comp70056_c0_seq6
192bp
 PREDICTED:_protein_RRNAD1-like_[Bombyx_mori]
GO:0000154 P rRNA modification
GO:0000179 F rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031167 P rRNA methylation
GO:0032259 P methylation
11868 O_BomoEE20682_complete:A_BomoEE_comp70056_c0_seq6
126bp
 PREDICTED:_protein_RRNAD1-like_[Bombyx_mori]
GO:0000154 P rRNA modification
GO:0000179 F rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031167 P rRNA methylation
GO:0032259 P methylation
11869 O_BomoEE20683_complete:A_BomoEE_comp70056_c0_seq6
120bp
 PREDICTED:_protein_RRNAD1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11870 O_BomoEE20684_complete:A_BomoEE_comp70056_c0_seq7
120bp
 PREDICTED:_protein_RRNAD1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11871 O_BomoEE20685_complete:A_BomoEE_comp70058_c1_seq1
172bp
 PREDICTED:_polypeptide_N-acetylgalactosaminyltransferase_11_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005112 F Notch binding
GO:0005575 C cellular_component
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0007368 P determination of left/right symmetry
GO:0008593 P regulation of Notch signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018243 P protein O-linked glycosylation via threonine
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
GO:0060271 P cilium assembly
GO:0061314 P Notch signaling involved in heart development
11872 O_BomoEE20686_complete:A_BomoEE_comp70058_c1_seq2
140bp
 PREDICTED:_polypeptide_N-acetylgalactosaminyltransferase_11_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005112 F Notch binding
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0007368 P determination of left/right symmetry
GO:0008593 P regulation of Notch signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016266 P O-glycan processing
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018243 P protein O-linked glycosylation via threonine
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
GO:0060271 P cilium assembly
GO:0061314 P Notch signaling involved in heart development
11873 O_BomoEE20687_complete:A_BomoEE_comp70058_c1_seq3
665bp
 PREDICTED:_polypeptide_N-acetylgalactosaminyltransferase_11_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0007424 P open tracheal system development
GO:0009312 P oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
11874 O_BomoEE20688_complete:A_BomoEE_comp70058_c1_seq3
125bp
11875 O_BomoEE20689_complete:A_BomoEE_comp70058_c1_seq4
697bp
 PREDICTED:_polypeptide_N-acetylgalactosaminyltransferase_11_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0007424 P open tracheal system development
GO:0009312 P oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
11876 O_BomoEE2068_complete:A_BomoEE_comp33439_c0_seq2
243bp
 PREDICTED:_serine/arginine-rich_splicing_factor_1A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
11877 O_BomoEE20690_complete:A_BomoEE_comp70058_c1_seq4
125bp
11878 O_BomoEE20691_complete:A_BomoEE_comp70060_c0_seq1
343bp
 PREDICTED:_uncharacterized_protein_LOC106714380_[Papilio_machaon]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030663 C COPI-coated vesicle membrane
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
11879 O_BomoEE20692_complete:A_BomoEE_comp70060_c0_seq1
128bp
 PREDICTED:_biogenesis_of_lysosome-related_organelles_complex_1_subunit_5_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016197 P endosomal transport
GO:0030133 C transport vesicle
GO:0031083 C BLOC-1 complex
11880 O_BomoEE20693_complete:A_BomoEE_comp70060_c0_seq2
996bp
 PREDICTED:_arf-GAP_with_SH3_domain,_ANK_repeat_and_PH_domain-containing_protein_2_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0060271 P cilium assembly
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