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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11521 O_BomoEE2036_complete:A_BomoEE_comp33414_c0_seq1
185bp
 ring_finger_protein_5_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006914 P autophagy
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036503 P ERAD pathway
GO:0036513 C Derlin-1 retrotranslocation complex
GO:0044390 F ubiquitin-like protein conjugating enzyme binding
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:1904264 F ubiquitin protein ligase activity
11522 O_BomoEE20370_complete:A_BomoEE_comp70001_c0_seq1
254bp
 PREDICTED:_probable_39S_ribosomal_protein_L24,_mitochondrial_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0003735 F structural constituent of ribosome
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0019233 P sensory perception of pain
GO:0030529 C ribonucleoprotein complex
11523 O_BomoEE20371_complete:A_BomoEE_comp70001_c0_seq1
171bp
 Glycerol_kinase-2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0046167 P glycerol-3-phosphate biosynthetic process
11524 O_BomoEE20372_complete:A_BomoEE_comp70001_c0_seq1
159bp
 Glycerol_kinase-2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0009409 P response to cold
GO:0010033 P response to organic substance
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0042393 F histone binding
GO:0042493 P response to xenobiotic stimulus
GO:0045471 P response to ethanol
GO:0046167 P glycerol-3-phosphate biosynthetic process
11525 O_BomoEE20373_complete:A_BomoEE_comp70001_c0_seq1
123bp
 Uncharacterised_protein_[Mycobacterium_tuberculosis]
11526 O_BomoEE20374_complete:A_BomoEE_comp70001_c0_seq1
104bp
 Uncharacterised_protein_[Bordetella_pertussis]
11527 O_BomoEE20375_complete:A_BomoEE_comp70001_c0_seq2
246bp
 Glycerol_kinase-2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0009409 P response to cold
GO:0010033 P response to organic substance
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0042393 F histone binding
GO:0042493 P response to xenobiotic stimulus
GO:0045471 P response to ethanol
GO:0046167 P glycerol-3-phosphate biosynthetic process
11528 O_BomoEE20376_complete:A_BomoEE_comp70001_c0_seq2
123bp
 Uncharacterised_protein_[Mycobacterium_tuberculosis]
11529 O_BomoEE20377_complete:A_BomoEE_comp70001_c0_seq3
254bp
 PREDICTED:_probable_39S_ribosomal_protein_L24,_mitochondrial_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0003735 F structural constituent of ribosome
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0019233 P sensory perception of pain
GO:0030529 C ribonucleoprotein complex
11530 O_BomoEE20378_complete:A_BomoEE_comp70001_c0_seq3
245bp
 Glycerol_kinase-2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0046167 P glycerol-3-phosphate biosynthetic process
11531 O_BomoEE20379_complete:A_BomoEE_comp70001_c0_seq3
104bp
 Uncharacterised_protein_[Bordetella_pertussis]
11532 O_BomoEE2037_5prime_partial:A_BomoEE_comp33414_c1_seq1
537bp
 PREDICTED:_pre-mRNA-processing_factor_19_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0000244 P spliceosomal tri-snRNP complex assembly
GO:0000245 P spliceosomal complex assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0001833 P inner cell mass cell proliferation
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0008380 P RNA splicing
GO:0008610 P lipid biosynthetic process
GO:0010498 P proteasomal protein catabolic process
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0034613 P cellular protein localization
GO:0035861 C site of double-strand break
GO:0042802 F identical protein binding
GO:0045665 P negative regulation of neuron differentiation
GO:0048026 P positive regulation of mRNA splicing, via spliceosome
GO:0048711 P positive regulation of astrocyte differentiation
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:0071013 C catalytic step 2 spliceosome
GO:0072422 P DNA damage checkpoint signaling
11533 O_BomoEE20380_complete:A_BomoEE_comp70001_c0_seq4
254bp
 PREDICTED:_probable_39S_ribosomal_protein_L24,_mitochondrial_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0003735 F structural constituent of ribosome
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0019233 P sensory perception of pain
GO:0030529 C ribonucleoprotein complex
11534 O_BomoEE20381_complete:A_BomoEE_comp70001_c0_seq4
228bp
 Glycerol_kinase-2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0009409 P response to cold
GO:0010033 P response to organic substance
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0042393 F histone binding
GO:0042493 P response to xenobiotic stimulus
GO:0045471 P response to ethanol
GO:0046167 P glycerol-3-phosphate biosynthetic process
11535 O_BomoEE20382_complete:A_BomoEE_comp70001_c0_seq4
171bp
 Glycerol_kinase-2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0046167 P glycerol-3-phosphate biosynthetic process
11536 O_BomoEE20383_complete:A_BomoEE_comp70001_c0_seq4
123bp
 Uncharacterised_protein_[Mycobacterium_tuberculosis]
11537 O_BomoEE20384_complete:A_BomoEE_comp70001_c0_seq4
104bp
 Uncharacterised_protein_[Bordetella_pertussis]
11538 O_BomoEE20385_complete:A_BomoEE_comp70001_c0_seq5
159bp
 Glycerol_kinase-2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0009409 P response to cold
GO:0010033 P response to organic substance
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0042393 F histone binding
GO:0042493 P response to xenobiotic stimulus
GO:0045471 P response to ethanol
GO:0046167 P glycerol-3-phosphate biosynthetic process
11539 O_BomoEE20386_complete:A_BomoEE_comp70001_c0_seq5
123bp
 Uncharacterised_protein_[Mycobacterium_tuberculosis]
11540 O_BomoEE20387_complete:A_BomoEE_comp70001_c0_seq7
254bp
 PREDICTED:_probable_39S_ribosomal_protein_L24,_mitochondrial_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0003735 F structural constituent of ribosome
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0019233 P sensory perception of pain
GO:0030529 C ribonucleoprotein complex
11541 O_BomoEE20388_complete:A_BomoEE_comp70001_c0_seq7
171bp
 Glycerol_kinase-2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0046167 P glycerol-3-phosphate biosynthetic process
11542 O_BomoEE20389_complete:A_BomoEE_comp70001_c0_seq7
104bp
 Uncharacterised_protein_[Bordetella_pertussis]
11543 O_BomoEE2038_complete:A_BomoEE_comp33415_c0_seq1
110bp
 N-acetyltransferase_[Bombyx_mori]
GO:0004596 F peptide alpha-N-acetyltransferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008080 F N-acetyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0017196 P N-terminal peptidyl-methionine acetylation
GO:0031416 C NatB complex
11544 O_BomoEE20390_complete:A_BomoEE_comp70001_c0_seq8
451bp
 Glycerol_kinase-2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0046167 P glycerol-3-phosphate biosynthetic process
11545 O_BomoEE20391_complete:A_BomoEE_comp70001_c0_seq8
254bp
 PREDICTED:_probable_39S_ribosomal_protein_L24,_mitochondrial_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0003735 F structural constituent of ribosome
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0019233 P sensory perception of pain
GO:0030529 C ribonucleoprotein complex
11546 O_BomoEE20392_complete:A_BomoEE_comp70001_c0_seq8
123bp
 Uncharacterised_protein_[Mycobacterium_tuberculosis]
11547 O_BomoEE20393_complete:A_BomoEE_comp70001_c0_seq8
104bp
 Uncharacterised_protein_[Bordetella_pertussis]
11548 O_BomoEE20394_complete:A_BomoEE_comp70001_c0_seq9
283bp
 Glycerol_kinase-2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0046167 P glycerol-3-phosphate biosynthetic process
11549 O_BomoEE20395_complete:A_BomoEE_comp70001_c0_seq9
254bp
 PREDICTED:_probable_39S_ribosomal_protein_L24,_mitochondrial_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0003735 F structural constituent of ribosome
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0019233 P sensory perception of pain
GO:0030529 C ribonucleoprotein complex
11550 O_BomoEE20396_complete:A_BomoEE_comp70001_c0_seq9
159bp
 Glycerol_kinase-2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0009409 P response to cold
GO:0010033 P response to organic substance
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0042393 F histone binding
GO:0042493 P response to xenobiotic stimulus
GO:0045471 P response to ethanol
GO:0046167 P glycerol-3-phosphate biosynthetic process
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