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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11431 O_BomoEE20289_complete:A_BomoEE_comp69988_c0_seq7
268bp
 PREDICTED:_EF-hand_domain-containing_protein_1-like_[Amyelois_transitella]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005930 C axoneme
GO:0008022 F protein C-terminus binding
GO:0021795 P cerebral cortex cell migration
GO:0043025 C neuronal cell body
GO:0072686 C mitotic spindle
11432 O_BomoEE2028_complete:A_BomoEE_comp33364_c0_seq1
774bp
 PREDICTED:_AFG3-like_protein_2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006461 P protein-containing complex assembly
GO:0006508 P proteolysis
GO:0007005 P mitochondrion organization
GO:0007409 P axonogenesis
GO:0007528 P neuromuscular junction development
GO:0008053 P mitochondrial fusion
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0021675 P nerve development
GO:0031966 C mitochondrial membrane
GO:0034982 P mitochondrial protein processing
GO:0040014 P regulation of multicellular organism growth
GO:0042407 P cristae formation
GO:0042552 P myelination
GO:0045041 P protein import into mitochondrial intermembrane space
GO:0046872 F metal ion binding
GO:0048747 P muscle cell development
GO:0060013 P righting reflex
11433 O_BomoEE20290_complete:A_BomoEE_comp69991_c2_seq1
919bp
 PREDICTED:_retinoblastoma-like_protein_1_isoform_X2_[Papilio_xuthus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007049 P cell cycle
GO:0008134 F transcription factor binding
GO:0010629 P negative regulation of gene expression
GO:0016568 P chromatin organization
GO:0043550 P regulation of lipid kinase activity
GO:0051726 P regulation of cell cycle
GO:1990841 F promoter-specific chromatin binding
11434 O_BomoEE20291_complete:A_BomoEE_comp69991_c3_seq1
296bp
 PREDICTED:_SAGA-associated_factor_29_homolog_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0019899 F enzyme binding
GO:0035064 F methylated histone binding
GO:0043966 P histone H3 acetylation
GO:0047485 F protein N-terminus binding
GO:0070461 C SAGA-type complex
GO:0071169 P establishment of protein localization to chromatin
11435 O_BomoEE20292_5prime_partial:A_BomoEE_comp69992_c0_seq2
131bp
11436 O_BomoEE20293_complete:A_BomoEE_comp69993_c2_seq1
1278bp
 PREDICTED:_collagen_alpha-1(III)_chain-like_isoform_X6_[Bombyx_mori]
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0045944 P positive regulation of transcription by RNA polymerase II
11437 O_BomoEE20294_complete:A_BomoEE_comp69993_c2_seq1
171bp
11438 O_BomoEE20295_complete:A_BomoEE_comp69993_c2_seq1
131bp
11439 O_BomoEE20296_complete:A_BomoEE_comp69993_c2_seq1
114bp
11440 O_BomoEE20297_complete:A_BomoEE_comp69993_c2_seq1
114bp
11441 O_BomoEE20298_complete:A_BomoEE_comp69993_c2_seq1
109bp
11442 O_BomoEE20299_complete:A_BomoEE_comp69993_c2_seq2
1331bp
 PREDICTED:_protein_pygopus-like_isoform_X4_[Bombyx_mori]
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0045944 P positive regulation of transcription by RNA polymerase II
11443 O_BomoEE2029_complete:A_BomoEE_comp33364_c0_seq1
115bp
 Uncharacterised_protein_[Bordetella_pertussis]
11444 O_BomoEE202_internal:A_BomoEE_comp3079_c0_seq1
139bp
 PREDICTED:_uncharacterized_protein_LOC101740474_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
11445 O_BomoEE20300_complete:A_BomoEE_comp69993_c2_seq2
171bp
11446 O_BomoEE20301_complete:A_BomoEE_comp69993_c2_seq2
131bp
11447 O_BomoEE20302_complete:A_BomoEE_comp69993_c2_seq2
114bp
11448 O_BomoEE20303_complete:A_BomoEE_comp69993_c2_seq2
114bp
11449 O_BomoEE20304_complete:A_BomoEE_comp69993_c2_seq2
109bp
11450 O_BomoEE20305_5prime_partial:A_BomoEE_comp69993_c2_seq3
956bp
 PREDICTED:_protein_pygopus-like_isoform_X2_[Bombyx_mori]
11451 O_BomoEE20306_complete:A_BomoEE_comp69993_c2_seq3
175bp
11452 O_BomoEE20307_complete:A_BomoEE_comp69993_c2_seq3
109bp
11453 O_BomoEE20308_complete:A_BomoEE_comp69993_c2_seq4
415bp
 PREDICTED:_protein_pygopus-like_isoform_X5_[Bombyx_mori]
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0045944 P positive regulation of transcription by RNA polymerase II
11454 O_BomoEE20309_complete:A_BomoEE_comp69993_c2_seq4
131bp
11455 O_BomoEE2030_complete:A_BomoEE_comp33367_c0_seq1
500bp
 Upf3_regulator_of_nonsense_transcripts-like_protein_B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 F RNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0045727 P positive regulation of translation
GO:0051028 P mRNA transport
11456 O_BomoEE20310_complete:A_BomoEE_comp69993_c2_seq4
101bp
11457 O_BomoEE20311_complete:A_BomoEE_comp69993_c2_seq5
428bp
 PREDICTED:_protein_pygopus-like_isoform_X4_[Bombyx_mori]
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0045944 P positive regulation of transcription by RNA polymerase II
11458 O_BomoEE20312_complete:A_BomoEE_comp69993_c2_seq5
131bp
11459 O_BomoEE20313_complete:A_BomoEE_comp69993_c2_seq5
114bp
11460 O_BomoEE20314_complete:A_BomoEE_comp69993_c2_seq6
987bp
 PREDICTED:_collagen_alpha-1(III)_chain-like_isoform_X6_[Bombyx_mori]
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