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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1141 O_BomoEE11027_complete:A_BomoEE_comp64693_c0_seq1
581bp
 X-ray_repair_cross-complementing_protein_5_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016829 F lyase activity
GO:0032508 P DNA duplex unwinding
GO:0042162 F telomeric DNA binding
GO:0043564 C Ku70:Ku80 complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0051575 F 5'-deoxyribose-5-phosphate lyase activity
GO:0070419 C nonhomologous end joining complex
GO:0071480 P cellular response to gamma radiation
GO:0071481 P cellular response to X-ray
1142 O_BomoEE11028_complete:A_BomoEE_comp64693_c0_seq1
114bp
1143 O_BomoEE11029_complete:A_BomoEE_comp64694_c0_seq1
453bp
 PREDICTED:_integrin-linked_protein_kinase_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001558 P regulation of cell growth
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0001725 C stress fiber
GO:0001954 P positive regulation of cell-matrix adhesion
GO:0003151 P outflow tract morphogenesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0006469 P negative regulation of protein kinase activity
GO:0007050 P regulation of cell cycle
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007569 P cell aging
GO:0008283 P cell population proliferation
GO:0008284 P positive regulation of cell population proliferation
GO:0010667 P negative regulation of cardiac muscle cell apoptotic process
GO:0010761 P fibroblast migration
GO:0014044 P Schwann cell development
GO:0014912 P negative regulation of smooth muscle cell migration
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017124 F SH3 domain binding
GO:0018105 P peptidyl-serine phosphorylation
GO:0019901 F protein kinase binding
GO:0021675 P nerve development
GO:0022011 P myelination in peripheral nervous system
GO:0030017 C sarcomere
GO:0030027 C lamellipodium
GO:0030030 P cell projection organization
GO:0030054 C cell junction
GO:0030335 P positive regulation of cell migration
GO:0030424 C axon
GO:0030513 P positive regulation of BMP signaling pathway
GO:0031012 C extracellular matrix
GO:0032288 P myelin assembly
GO:0032956 P regulation of actin cytoskeleton organization
GO:0034329 P cell junction assembly
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0042327 P positive regulation of phosphorylation
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0043034 C costamere
GO:0043066 P negative regulation of apoptotic process
GO:0043195 C terminal bouton
GO:0043198 C dendritic shaft
GO:0043206 P supramolecular fiber organization
GO:0043234 C protein-containing complex
GO:0043406 P positive regulation of MAP kinase activity
GO:0043410 P positive regulation of MAPK cascade
GO:0043491 P protein kinase B signaling
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045663 P positive regulation of myoblast differentiation
GO:0045669 P positive regulation of osteoblast differentiation
GO:0045773 P positive regulation of axon extension
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0048812 P neuron projection morphogenesis
GO:0050772 P positive regulation of axonogenesis
GO:0050775 P positive regulation of dendrite morphogenesis
GO:0051291 P protein heterooligomerization
GO:0051897 P positive regulation of protein kinase B signaling
GO:0070527 P platelet aggregation
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:2000178 P negative regulation of neural precursor cell proliferation
1144 O_BomoEE1102_internal:A_BomoEE_comp24584_c0_seq1
133bp
1145 O_BomoEE11030_3prime_partial:A_BomoEE_comp64695_c0_seq1
399bp
 PREDICTED:_HBS1-like_protein_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0006412 P translation
GO:0006414 P translational elongation
1146 O_BomoEE11031_5prime_partial:A_BomoEE_comp64695_c1_seq1
281bp
 PREDICTED:_HBS1-like_protein_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0032790 P ribosome disassembly
GO:0070062 C extracellular exosome
1147 O_BomoEE11032_complete:A_BomoEE_comp64695_c1_seq1
127bp
1148 O_BomoEE11033_complete:A_BomoEE_comp64695_c1_seq1
115bp
 hypothetical_protein_ALC62_04822,_partial_[Cyphomyrmex_costatus]
1149 O_BomoEE11034_3prime_partial:A_BomoEE_comp64699_c0_seq1
271bp
 PREDICTED:_uncharacterized_protein_LOC105841982_[Bombyx_mori]
1150 O_BomoEE11035_complete:A_BomoEE_comp64699_c0_seq1
113bp
1151 O_BomoEE11036_5prime_partial:A_BomoEE_comp64699_c0_seq1
102bp
 PREDICTED:_uncharacterized_protein_LOC100907602_[Metaseiulus_occidentalis]
1152 O_BomoEE11037_complete:A_BomoEE_comp64699_c0_seq4
111bp
 PREDICTED:_uncharacterized_protein_LOC100907913_[Metaseiulus_occidentalis]
1153 O_BomoEE11038_3prime_partial:A_BomoEE_comp64699_c0_seq5
121bp
 PREDICTED:_uncharacterized_protein_LOC100907913_[Metaseiulus_occidentalis]
1154 O_BomoEE11039_complete:A_BomoEE_comp64704_c0_seq1
422bp
 PREDICTED:_alpha-1,3/1,6-mannosyltransferase_ALG2_[Amyelois_transitella]
GO:0000033 F alpha-1,3-mannosyltransferase activity
GO:0004378 F GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0033577 P protein glycosylation in endoplasmic reticulum
GO:0046982 F protein heterodimerization activity
GO:0047485 F protein N-terminus binding
GO:0048306 F calcium-dependent protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051592 P response to calcium ion
GO:0097502 P mannosylation
1155 O_BomoEE1103_5prime_partial:A_BomoEE_comp24593_c0_seq1
125bp
 reverse_transcriptase_[Bombyx_mori]
1156 O_BomoEE11040_5prime_partial:A_BomoEE_comp64710_c0_seq1
447bp
 PREDICTED:_SH2_domain-containing_protein_4A-like_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0010923 P negative regulation of phosphatase activity
GO:0019902 F phosphatase binding
1157 O_BomoEE11041_complete:A_BomoEE_comp64710_c0_seq1
100bp
1158 O_BomoEE11042_complete:A_BomoEE_comp64710_c0_seq2
437bp
 PREDICTED:_SH2_domain-containing_protein_4A-like_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0010923 P negative regulation of phosphatase activity
GO:0019902 F phosphatase binding
1159 O_BomoEE11043_complete:A_BomoEE_comp64710_c0_seq2
136bp
1160 O_BomoEE11044_complete:A_BomoEE_comp64710_c0_seq2
118bp
1161 O_BomoEE11045_complete:A_BomoEE_comp64710_c0_seq2
100bp
1162 O_BomoEE11046_5prime_partial:A_BomoEE_comp64711_c0_seq1
100bp
1163 O_BomoEE11047_complete:A_BomoEE_comp64711_c0_seq2
277bp
 PREDICTED:_trypsin_3A1-like_[Papilio_polytes]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007586 P digestion
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
1164 O_BomoEE11048_5prime_partial:A_BomoEE_comp64711_c0_seq2
100bp
1165 O_BomoEE11049_complete:A_BomoEE_comp64711_c0_seq3
161bp
 PREDICTED:_trypsin_3A1-like_[Papilio_polytes]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0007049 P cell cycle
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
1166 O_BomoEE1104_3prime_partial:A_BomoEE_comp24613_c0_seq2
130bp
 PREDICTED:_serine_racemase-like_[Bombyx_mori]
GO:0003941 F L-serine ammonia-lyase activity
GO:0004794 F L-threonine ammonia-lyase activity
GO:0005737 C cytoplasm
GO:0006520 P cellular amino acid metabolic process
GO:0006565 P L-serine catabolic process
GO:0006567 P threonine catabolic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009082 P branched-chain amino acid biosynthetic process
GO:0009097 P isoleucine biosynthetic process
GO:0016597 F amino acid binding
GO:0016829 F lyase activity
GO:0030170 F pyridoxal phosphate binding
1167 O_BomoEE11050_3prime_partial:A_BomoEE_comp64715_c0_seq1
482bp
 PREDICTED:_syntaxin-binding_protein_5_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0008021 C synaptic vesicle
GO:0010468 P regulation of gene expression
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0017075 F syntaxin-1 binding
GO:0017137 F small GTPase binding
GO:0030054 C cell junction
GO:0030141 C secretory granule
GO:0030193 P regulation of blood coagulation
GO:0030659 C cytoplasmic vesicle membrane
GO:0031201 C SNARE complex
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045921 P positive regulation of exocytosis
GO:0050708 P regulation of protein secretion
1168 O_BomoEE11051_complete:A_BomoEE_comp64715_c0_seq1
392bp
 coproporphirynogen_oxidase_[Bombyx_mori]
GO:0004109 F coproporphyrinogen oxidase activity
GO:0005739 C mitochondrion
GO:0006779 P porphyrin-containing compound biosynthetic process
GO:0006782 P protoporphyrinogen IX biosynthetic process
GO:0006783 P heme biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0042803 F protein homodimerization activity
GO:0055114 P obsolete oxidation-reduction process
1169 O_BomoEE11052_complete:A_BomoEE_comp64715_c0_seq1
180bp
 Uncharacterized_protein_OBRU01_20138_[Operophtera_brumata]
1170 O_BomoEE11053_complete:A_BomoEE_comp64715_c0_seq1
102bp
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