SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11281 O_BomoEE20153_complete:A_BomoEE_comp69963_c0_seq1
759bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11282 O_BomoEE20154_3prime_partial:A_BomoEE_comp69963_c0_seq2
933bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11283 O_BomoEE20155_complete:A_BomoEE_comp69963_c0_seq3
759bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11284 O_BomoEE20156_complete:A_BomoEE_comp69963_c0_seq3
243bp
 PREDICTED:_tetratricopeptide_repeat_protein_17-like,_partial_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11285 O_BomoEE20157_3prime_partial:A_BomoEE_comp69963_c0_seq4
678bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11286 O_BomoEE20158_complete:A_BomoEE_comp69963_c0_seq4
243bp
 PREDICTED:_tetratricopeptide_repeat_protein_17-like,_partial_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11287 O_BomoEE20159_complete:A_BomoEE_comp69963_c0_seq4
119bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11288 O_BomoEE2015_complete:A_BomoEE_comp33337_c1_seq1
160bp
 hypothetical_protein_KGM_13352_[Danaus_plexippus]
11289 O_BomoEE20160_complete:A_BomoEE_comp69963_c0_seq5
670bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11290 O_BomoEE20161_complete:A_BomoEE_comp69963_c0_seq5
119bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11291 O_BomoEE20162_3prime_partial:A_BomoEE_comp69963_c0_seq6
661bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11292 O_BomoEE20163_complete:A_BomoEE_comp69963_c0_seq6
103bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11293 O_BomoEE20164_3prime_partial:A_BomoEE_comp69963_c0_seq7
678bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11294 O_BomoEE20165_complete:A_BomoEE_comp69963_c0_seq7
199bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11295 O_BomoEE20166_complete:A_BomoEE_comp69963_c0_seq8
743bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11296 O_BomoEE20167_complete:A_BomoEE_comp69963_c0_seq9
670bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11297 O_BomoEE20168_complete:A_BomoEE_comp69963_c0_seq9
381bp
 hypothetical_protein_KGM_11945_[Danaus_plexippus]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11298 O_BomoEE20169_3prime_partial:A_BomoEE_comp69963_c0_seq10
678bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11299 O_BomoEE2016_complete:A_BomoEE_comp33340_c0_seq1
1247bp
 PREDICTED:_vigilin_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008289 F lipid binding
GO:0034364 C high-density lipoprotein particle
GO:0044822 F RNA binding
11300 O_BomoEE20170_complete:A_BomoEE_comp69963_c0_seq10
285bp
 PREDICTED:_tetratricopeptide_repeat_protein_17-like,_partial_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11301 O_BomoEE20171_3prime_partial:A_BomoEE_comp69963_c0_seq11
751bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11302 O_BomoEE20172_complete:A_BomoEE_comp69963_c0_seq12
925bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11303 O_BomoEE20173_3prime_partial:A_BomoEE_comp69963_c0_seq13
1029bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11304 O_BomoEE20174_3prime_partial:A_BomoEE_comp69963_c0_seq14
847bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11305 O_BomoEE20175_3prime_partial:A_BomoEE_comp69963_c0_seq15
678bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11306 O_BomoEE20176_complete:A_BomoEE_comp69963_c0_seq15
119bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11307 O_BomoEE20177_complete:A_BomoEE_comp69963_c0_seq16
1021bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11308 O_BomoEE20178_complete:A_BomoEE_comp69963_c0_seq17
670bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11309 O_BomoEE20179_complete:A_BomoEE_comp69963_c0_seq17
199bp
 PREDICTED:_tetratricopeptide_repeat_protein_17_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
11310 O_BomoEE2017_complete:A_BomoEE_comp33340_c0_seq1
113bp
previous next from show/95730

- SilkBase 1999-2023 -