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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11071 O_BomoEE19966_complete:A_BomoEE_comp69911_c0_seq12
341bp
 PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
11072 O_BomoEE19967_complete:A_BomoEE_comp69911_c0_seq12
171bp
11073 O_BomoEE19968_5prime_partial:A_BomoEE_comp69911_c0_seq12
138bp
11074 O_BomoEE19969_complete:A_BomoEE_comp69911_c0_seq13
252bp
 PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005874 C microtubule
GO:0006810 P transport
GO:0007281 P germ cell development
GO:0008354 P germ cell migration
11075 O_BomoEE1996_complete:A_BomoEE_comp33293_c0_seq1
136bp
11076 O_BomoEE19970_complete:A_BomoEE_comp69911_c0_seq13
171bp
11077 O_BomoEE19971_5prime_partial:A_BomoEE_comp69911_c0_seq13
135bp
11078 O_BomoEE19972_3prime_partial:A_BomoEE_comp69911_c0_seq14
276bp
 PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005874 C microtubule
GO:0006810 P transport
GO:0007281 P germ cell development
GO:0008354 P germ cell migration
11079 O_BomoEE19973_complete:A_BomoEE_comp69911_c0_seq14
171bp
11080 O_BomoEE19974_complete:A_BomoEE_comp69911_c0_seq15
252bp
 PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005874 C microtubule
GO:0006810 P transport
GO:0007281 P germ cell development
GO:0008354 P germ cell migration
11081 O_BomoEE19975_complete:A_BomoEE_comp69911_c0_seq15
171bp
11082 O_BomoEE19976_5prime_partial:A_BomoEE_comp69911_c0_seq15
135bp
11083 O_BomoEE19977_complete:A_BomoEE_comp69911_c0_seq16
341bp
 PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
11084 O_BomoEE19978_complete:A_BomoEE_comp69911_c0_seq16
171bp
11085 O_BomoEE19979_5prime_partial:A_BomoEE_comp69911_c0_seq16
138bp
11086 O_BomoEE1997_complete:A_BomoEE_comp33297_c0_seq1
154bp
 NADH_dehydrogenase_isoform_1_[Bombyx_mori]
GO:0000036 F acyl carrier activity
GO:0005739 C mitochondrion
GO:0006120 P mitochondrial electron transport, NADH to ubiquinone
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0010906 P regulation of glucose metabolic process
GO:0019233 P sensory perception of pain
GO:0031177 F phosphopantetheine binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
11087 O_BomoEE19980_complete:A_BomoEE_comp69911_c0_seq17
278bp
 PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005874 C microtubule
GO:0006810 P transport
GO:0007281 P germ cell development
GO:0008354 P germ cell migration
11088 O_BomoEE19981_complete:A_BomoEE_comp69911_c0_seq17
171bp
11089 O_BomoEE19982_5prime_partial:A_BomoEE_comp69911_c0_seq17
138bp
11090 O_BomoEE19983_complete:A_BomoEE_comp69911_c0_seq18
315bp
 PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
11091 O_BomoEE19984_complete:A_BomoEE_comp69911_c0_seq18
171bp
11092 O_BomoEE19985_5prime_partial:A_BomoEE_comp69911_c0_seq18
135bp
11093 O_BomoEE19986_3prime_partial:A_BomoEE_comp69911_c0_seq19
276bp
 PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005874 C microtubule
GO:0006810 P transport
GO:0007281 P germ cell development
GO:0008354 P germ cell migration
11094 O_BomoEE19987_complete:A_BomoEE_comp69911_c0_seq19
171bp
11095 O_BomoEE19988_complete:A_BomoEE_comp69911_c0_seq21
315bp
 PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
11096 O_BomoEE19989_complete:A_BomoEE_comp69911_c0_seq21
171bp
11097 O_BomoEE1998_complete:A_BomoEE_comp33297_c0_seq2
154bp
 NADH_dehydrogenase_isoform_2_[Bombyx_mori]
GO:0000036 F acyl carrier activity
GO:0005739 C mitochondrion
GO:0006120 P mitochondrial electron transport, NADH to ubiquinone
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0010906 P regulation of glucose metabolic process
GO:0019233 P sensory perception of pain
GO:0031177 F phosphopantetheine binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
11098 O_BomoEE19990_5prime_partial:A_BomoEE_comp69911_c0_seq21
135bp
11099 O_BomoEE19991_5prime_partial:A_BomoEE_comp69912_c0_seq2
706bp
 PREDICTED:_UHRF1-binding_protein_1-like_isoform_X1_[Bombyx_mori]
11100 O_BomoEE19992_complete:A_BomoEE_comp69912_c0_seq2
153bp
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