SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10951 O_BomoEE19858_complete:A_BomoEE_comp69897_c0_seq1
674bp
 PREDICTED:_probable_protein_phosphatase_CG10417_isoform_X2_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0043169 F cation binding
GO:0046872 F metal ion binding
10952 O_BomoEE19859_complete:A_BomoEE_comp69899_c0_seq2
362bp
 PREDICTED:_UDP-glucose_4-epimerase-like_[Bombyx_mori]
GO:0003974 F UDP-N-acetylglucosamine 4-epimerase activity
GO:0003978 F UDP-glucose 4-epimerase activity
GO:0005975 P carbohydrate metabolic process
GO:0006012 P galactose metabolic process
GO:0016853 F isomerase activity
GO:0016857 F racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0019388 P galactose catabolic process
GO:0033499 P galactose catabolic process via UDP-galactose
GO:0042803 F protein homodimerization activity
GO:0061623 P glycolytic process from galactose
GO:0070062 C extracellular exosome
10953 O_BomoEE1985_complete:A_BomoEE_comp33269_c0_seq1
137bp
10954 O_BomoEE19860_5prime_partial:A_BomoEE_comp69899_c0_seq2
113bp
10955 O_BomoEE19861_internal:A_BomoEE_comp69899_c2_seq1
311bp
 PREDICTED:_zinc_finger_protein_OZF-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10956 O_BomoEE19862_5prime_partial:A_BomoEE_comp69899_c2_seq1
160bp
10957 O_BomoEE19863_3prime_partial:A_BomoEE_comp69899_c2_seq1
143bp
10958 O_BomoEE19864_3prime_partial:A_BomoEE_comp69899_c2_seq2
341bp
 PREDICTED:_zinc_finger_protein_OZF-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10959 O_BomoEE19865_5prime_partial:A_BomoEE_comp69899_c2_seq2
160bp
10960 O_BomoEE19866_3prime_partial:A_BomoEE_comp69899_c2_seq2
143bp
10961 O_BomoEE19867_5prime_partial:A_BomoEE_comp69899_c2_seq3
160bp
10962 O_BomoEE19868_3prime_partial:A_BomoEE_comp69899_c2_seq3
143bp
10963 O_BomoEE19869_internal:A_BomoEE_comp69899_c2_seq4
289bp
 PREDICTED:_zinc_finger_protein_OZF-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10964 O_BomoEE1986_complete:A_BomoEE_comp33284_c0_seq1
767bp
 PREDICTED:_protein_transport_protein_Sec23A_isoform_X2_[Papilio_machaon]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030127 C COPII vesicle coat
GO:0030134 C COPII-coated ER to Golgi transport vesicle
GO:0030868 C smooth endoplasmic reticulum membrane
GO:0048471 C perinuclear region of cytoplasm
10965 O_BomoEE19870_5prime_partial:A_BomoEE_comp69899_c2_seq4
160bp
10966 O_BomoEE19871_3prime_partial:A_BomoEE_comp69899_c2_seq4
143bp
10967 O_BomoEE19872_3prime_partial:A_BomoEE_comp69899_c2_seq5
319bp
 PREDICTED:_zinc_finger_protein_OZF-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10968 O_BomoEE19873_5prime_partial:A_BomoEE_comp69899_c2_seq5
160bp
10969 O_BomoEE19874_3prime_partial:A_BomoEE_comp69899_c2_seq5
143bp
10970 O_BomoEE19875_5prime_partial:A_BomoEE_comp69899_c2_seq6
160bp
10971 O_BomoEE19876_3prime_partial:A_BomoEE_comp69899_c2_seq6
143bp
10972 O_BomoEE19877_5prime_partial:A_BomoEE_comp69899_c2_seq7
160bp
10973 O_BomoEE19878_3prime_partial:A_BomoEE_comp69899_c2_seq7
143bp
10974 O_BomoEE19879_complete:A_BomoEE_comp69899_c2_seq7
141bp
 PREDICTED:_zinc_finger_protein_OZF-like_isoform_X2_[Bombyx_mori]
10975 O_BomoEE1987_complete:A_BomoEE_comp33284_c0_seq1
160bp
10976 O_BomoEE19880_5prime_partial:A_BomoEE_comp69899_c2_seq8
160bp
10977 O_BomoEE19881_3prime_partial:A_BomoEE_comp69899_c2_seq8
143bp
10978 O_BomoEE19882_5prime_partial:A_BomoEE_comp69899_c2_seq8
111bp
 PREDICTED:_zinc_finger_protein_OZF-like_isoform_X2_[Bombyx_mori]
10979 O_BomoEE19883_complete:A_BomoEE_comp69901_c0_seq2
182bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_cytosol_aminopeptidase-like_[Plutella_xylostella]
GO:0004177 F aminopeptidase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0019538 P protein metabolic process
GO:0030145 F manganese ion binding
GO:0046872 F metal ion binding
10980 O_BomoEE19884_complete:A_BomoEE_comp69901_c0_seq4
129bp
 PREDICTED:_cytosol_aminopeptidase-like_[Amyelois_transitella]
GO:0004177 F aminopeptidase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0019538 P protein metabolic process
GO:0030145 F manganese ion binding
GO:0046872 F metal ion binding
previous next from show/95730

- SilkBase 1999-2023 -