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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10711 O_BomoEE19641_complete:A_BomoEE_comp69825_c0_seq3
1072bp
 PREDICTED:_uncharacterized_protein_LOC105842420_[Bombyx_mori]
10712 O_BomoEE19642_complete:A_BomoEE_comp69825_c0_seq3
121bp
10713 O_BomoEE19643_5prime_partial:A_BomoEE_comp69825_c0_seq3
103bp
10714 O_BomoEE19644_complete:A_BomoEE_comp69825_c0_seq3
100bp
10715 O_BomoEE19645_5prime_partial:A_BomoEE_comp69830_c1_seq1
320bp
 PREDICTED:_uncharacterized_protein_LOC101745835_isoform_X4_[Bombyx_mori]
10716 O_BomoEE19646_5prime_partial:A_BomoEE_comp69830_c1_seq2
463bp
 PREDICTED:_uncharacterized_protein_LOC101745835_isoform_X4_[Bombyx_mori]
10717 O_BomoEE19647_complete:A_BomoEE_comp69830_c1_seq2
114bp
10718 O_BomoEE19648_5prime_partial:A_BomoEE_comp69830_c1_seq3
439bp
 PREDICTED:_uncharacterized_protein_LOC101745835_isoform_X5_[Bombyx_mori]
10719 O_BomoEE19649_complete:A_BomoEE_comp69830_c1_seq3
114bp
10720 O_BomoEE1964_complete:A_BomoEE_comp33210_c0_seq1
892bp
 PREDICTED:_WD_repeat-containing_protein_36_[Amyelois_transitella]
GO:0001895 P retina homeostasis
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0007601 P visual perception
GO:0008150 P biological_process
GO:0030516 P regulation of axon extension
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
GO:0050896 P response to stimulus
10721 O_BomoEE19650_complete:A_BomoEE_comp69834_c0_seq1
2489bp
 PREDICTED:_nucleosome-remodeling_factor_subunit_NURF301_[Papilio_xuthus]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016589 C NURF complex
GO:0016922 F nuclear receptor binding
GO:0019233 P sensory perception of pain
GO:0030097 P hemopoiesis
GO:0035064 F methylated histone binding
GO:0035073 P pupariation
GO:0035076 P ecdysone receptor-mediated signaling pathway
GO:0042766 P nucleosome mobilization
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045824 P negative regulation of innate immune response
GO:0046331 P lateral inhibition
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0046872 F metal ion binding
GO:0048515 P spermatid differentiation
GO:0048813 P dendrite morphogenesis
GO:0070577 F lysine-acetylated histone binding
GO:0070615 F ATP-dependent chromatin remodeler activity
10722 O_BomoEE19651_complete:A_BomoEE_comp69842_c0_seq1
501bp
 PREDICTED:_uncharacterized_protein_PFB0145c-like_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000226 P microtubule cytoskeleton organization
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007052 P mitotic spindle organization
GO:0016020 C membrane
GO:0034451 C centriolar satellite
GO:0042384 P cilium assembly
GO:0090316 P positive regulation of intracellular protein transport
10723 O_BomoEE19652_complete:A_BomoEE_comp69842_c0_seq1
210bp
10724 O_BomoEE19653_complete:A_BomoEE_comp69842_c0_seq1
151bp
10725 O_BomoEE19654_complete:A_BomoEE_comp69842_c0_seq2
387bp
 PREDICTED:_transcription_initiation_factor_TFIID_subunit_7-like_[Papilio_polytes]
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008134 F transcription factor binding
GO:0035035 F histone acetyltransferase binding
GO:0044212 F transcription cis-regulatory region binding
GO:0051123 P RNA polymerase II preinitiation complex assembly
10726 O_BomoEE19655_complete:A_BomoEE_comp69842_c0_seq2
106bp
10727 O_BomoEE19656_5prime_partial:A_BomoEE_comp69842_c0_seq3
915bp
 PREDICTED:_uncharacterized_protein_PFB0145c-like_[Bombyx_mori]
10728 O_BomoEE19657_complete:A_BomoEE_comp69842_c0_seq3
133bp
10729 O_BomoEE19658_5prime_partial:A_BomoEE_comp69842_c0_seq3
132bp
10730 O_BomoEE19659_5prime_partial:A_BomoEE_comp69842_c0_seq3
124bp
10731 O_BomoEE1965_complete:A_BomoEE_comp33210_c0_seq1
162bp
10732 O_BomoEE19660_5prime_partial:A_BomoEE_comp69842_c0_seq4
1333bp
 PREDICTED:_uncharacterized_protein_PFB0145c-like_[Bombyx_mori]
10733 O_BomoEE19661_complete:A_BomoEE_comp69842_c0_seq4
210bp
10734 O_BomoEE19662_complete:A_BomoEE_comp69842_c0_seq4
151bp
10735 O_BomoEE19663_complete:A_BomoEE_comp69842_c0_seq4
133bp
10736 O_BomoEE19664_5prime_partial:A_BomoEE_comp69842_c0_seq4
132bp
10737 O_BomoEE19665_5prime_partial:A_BomoEE_comp69842_c0_seq4
124bp
10738 O_BomoEE19666_complete:A_BomoEE_comp69842_c1_seq1
132bp
10739 O_BomoEE19667_complete:A_BomoEE_comp69842_c1_seq1
116bp
10740 O_BomoEE19668_complete:A_BomoEE_comp69843_c0_seq1
241bp
 PREDICTED:_probable_dolichyl_pyrophosphate_Glc1Man9GlcNAc2_alpha-1,3-glucosyltransferase_[Amyelois_transitella]
GO:0000033 F alpha-1,3-mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006490 P oligosaccharide-lipid intermediate biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0042281 F dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
GO:0097502 P mannosylation
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