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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10171 O_BomoEE19155_5prime_partial:A_BomoEE_comp69657_c0_seq13
269bp
 PREDICTED:_uncharacterized_protein_LOC106136083,_partial_[Amyelois_transitella]
10172 O_BomoEE19156_3prime_partial:A_BomoEE_comp69658_c0_seq1
651bp
 PREDICTED:_sodium_leak_channel_non-selective_protein_isoform_X1_[Papilio_xuthus]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005261 F cation channel activity
GO:0005272 F sodium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006816 P calcium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0055085 P transmembrane transport
GO:0086010 P membrane depolarization during action potential
GO:0098655 P cation transmembrane transport
10173 O_BomoEE19157_5prime_partial:A_BomoEE_comp69658_c0_seq1
102bp
10174 O_BomoEE19158_3prime_partial:A_BomoEE_comp69658_c0_seq2
424bp
 PREDICTED:_sodium_leak_channel_non-selective_protein_isoform_X2_[Papilio_xuthus]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005261 F cation channel activity
GO:0005272 F sodium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006816 P calcium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0055085 P transmembrane transport
GO:0086010 P membrane depolarization during action potential
GO:0098655 P cation transmembrane transport
10175 O_BomoEE19159_complete:A_BomoEE_comp69658_c0_seq2
250bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_sodium_leak_channel_non-selective_protein_[Papilio_machaon]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005261 F cation channel activity
GO:0005272 F sodium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006816 P calcium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0055085 P transmembrane transport
GO:0086010 P membrane depolarization during action potential
GO:0098655 P cation transmembrane transport
10176 O_BomoEE1915_complete:A_BomoEE_comp33115_c0_seq1
128bp
10177 O_BomoEE19160_5prime_partial:A_BomoEE_comp69658_c0_seq2
102bp
10178 O_BomoEE19161_3prime_partial:A_BomoEE_comp69658_c0_seq3
676bp
 PREDICTED:_sodium_leak_channel_non-selective_protein_isoform_X1_[Papilio_xuthus]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005261 F cation channel activity
GO:0005272 F sodium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006816 P calcium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0055085 P transmembrane transport
GO:0086010 P membrane depolarization during action potential
GO:0098655 P cation transmembrane transport
10179 O_BomoEE19162_5prime_partial:A_BomoEE_comp69658_c0_seq3
102bp
10180 O_BomoEE19163_3prime_partial:A_BomoEE_comp69658_c0_seq4
449bp
 PREDICTED:_sodium_leak_channel_non-selective_protein_isoform_X2_[Papilio_xuthus]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005261 F cation channel activity
GO:0005272 F sodium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006816 P calcium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0055085 P transmembrane transport
GO:0086010 P membrane depolarization during action potential
GO:0098655 P cation transmembrane transport
10181 O_BomoEE19164_complete:A_BomoEE_comp69658_c0_seq4
250bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_sodium_leak_channel_non-selective_protein_[Papilio_machaon]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005261 F cation channel activity
GO:0005272 F sodium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006816 P calcium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0055085 P transmembrane transport
GO:0086010 P membrane depolarization during action potential
GO:0098655 P cation transmembrane transport
10182 O_BomoEE19165_5prime_partial:A_BomoEE_comp69658_c0_seq4
102bp
10183 O_BomoEE19166_complete:A_BomoEE_comp69660_c0_seq2
747bp
 PREDICTED:_protein_asteroid_[Bombyx_mori]
GO:0001745 P compound eye morphogenesis
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007526 P larval somatic muscle development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
10184 O_BomoEE19167_3prime_partial:A_BomoEE_comp69662_c0_seq2
621bp
 PREDICTED:_uncharacterized_protein_LOC101742772_isoform_X1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0050896 P response to stimulus
10185 O_BomoEE19168_5prime_partial:A_BomoEE_comp69662_c0_seq2
107bp
10186 O_BomoEE19169_complete:A_BomoEE_comp69662_c0_seq2
103bp
10187 O_BomoEE1916_complete:A_BomoEE_comp33121_c0_seq1
222bp
 PREDICTED:_exosome_complex_component_RRP46_[Amyelois_transitella]
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006401 P RNA catabolic process
GO:0016075 P rRNA catabolic process
GO:0031125 P rRNA 3'-end processing
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475 P U4 snRNA 3'-end processing
GO:0035327 C euchromatin
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0045006 P DNA deamination
GO:0051607 P defense response to virus
GO:0071028 P nuclear mRNA surveillance
GO:0071051 P polyadenylation-dependent snoRNA 3'-end processing
10188 O_BomoEE19170_5prime_partial:A_BomoEE_comp69662_c0_seq2
102bp
10189 O_BomoEE19171_3prime_partial:A_BomoEE_comp69662_c0_seq3
621bp
 PREDICTED:_uncharacterized_protein_LOC101742772_isoform_X1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0050896 P response to stimulus
10190 O_BomoEE19172_5prime_partial:A_BomoEE_comp69662_c0_seq3
107bp
10191 O_BomoEE19173_complete:A_BomoEE_comp69662_c0_seq3
103bp
10192 O_BomoEE19174_5prime_partial:A_BomoEE_comp69662_c0_seq3
102bp
10193 O_BomoEE19175_internal:A_BomoEE_comp69664_c0_seq1
1981bp
 PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
10194 O_BomoEE19176_complete:A_BomoEE_comp69664_c0_seq1
206bp
10195 O_BomoEE19177_complete:A_BomoEE_comp69664_c0_seq1
169bp
10196 O_BomoEE19178_complete:A_BomoEE_comp69664_c0_seq1
160bp
10197 O_BomoEE19179_complete:A_BomoEE_comp69664_c0_seq1
106bp
10198 O_BomoEE1917_complete:A_BomoEE_comp33121_c0_seq2
205bp
 PREDICTED:_exosome_complex_component_RRP46_[Plutella_xylostella]
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006401 P RNA catabolic process
GO:0016075 P rRNA catabolic process
GO:0031125 P rRNA 3'-end processing
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475 P U4 snRNA 3'-end processing
GO:0035327 C euchromatin
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0045006 P DNA deamination
GO:0051607 P defense response to virus
GO:0071028 P nuclear mRNA surveillance
GO:0071051 P polyadenylation-dependent snoRNA 3'-end processing
10199 O_BomoEE19180_internal:A_BomoEE_comp69664_c0_seq2
1993bp
 PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
10200 O_BomoEE19181_complete:A_BomoEE_comp69664_c0_seq2
206bp
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