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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1 O_BomoEE10000_complete:A_BomoEE_comp63829_c0_seq1
167bp
2 O_BomoEE10001_complete:A_BomoEE_comp63829_c0_seq1
141bp
3 O_BomoEE10002_complete:A_BomoEE_comp63834_c0_seq2
145bp
 hypothetical_protein_KGM_15207_[Danaus_plexippus]
4 O_BomoEE10003_complete:A_BomoEE_comp63838_c0_seq1
202bp
 PREDICTED:_uncharacterized_protein_LOC101742676_isoform_X1_[Bombyx_mori]
5 O_BomoEE10004_complete:A_BomoEE_comp63838_c0_seq2
221bp
 PREDICTED:_uncharacterized_protein_LOC101742676_isoform_X1_[Bombyx_mori]
6 O_BomoEE10005_complete:A_BomoEE_comp63840_c0_seq1
134bp
 PREDICTED:_B-cell_CLL/lymphoma_7_protein_family_member_A_[Papilio_xuthus]
GO:0006915 P apoptotic process
GO:0016055 P Wnt signaling pathway
GO:0030154 P cell differentiation
7 O_BomoEE10006_3prime_partial:A_BomoEE_comp63844_c0_seq1
251bp
 Uncharacterized_protein_OBRU01_21887_[Operophtera_brumata]
8 O_BomoEE10007_complete:A_BomoEE_comp63848_c0_seq1
515bp
 methoprene-tolerant_protein_1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003053 P circadian regulation of heart rate
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007622 P rhythmic behavior
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008134 F transcription factor binding
GO:0009266 P response to temperature stimulus
GO:0009649 P entrainment of circadian clock
GO:0032922 P circadian regulation of gene expression
GO:0043066 P negative regulation of apoptotic process
GO:0045187 P regulation of circadian sleep/wake cycle, sleep
GO:0045475 P locomotor rhythm
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048148 P behavioral response to cocaine
GO:0048511 P rhythmic process
9 O_BomoEE10008_complete:A_BomoEE_comp63848_c0_seq1
121bp
10 O_BomoEE10009_5prime_partial:A_BomoEE_comp63850_c0_seq1
164bp
11 O_BomoEE1000_internal:A_BomoEE_comp22178_c1_seq1
107bp
 PREDICTED:_C3_and_PZP-like_alpha-2-macroglobulin_domain-containing_protein_8_[Papilio_machaon]
GO:0004866 F endopeptidase inhibitor activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
12 O_BomoEE10010_complete:A_BomoEE_comp63851_c0_seq1
1008bp
 PREDICTED:_activating_transcription_factor_7-interacting_protein_1_[Papilio_machaon]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006306 P DNA methylation
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016887 F ATP hydrolysis activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045898 P regulation of RNA polymerase II transcription preinitiation complex assembly
13 O_BomoEE10011_complete:A_BomoEE_comp63851_c0_seq1
176bp
14 O_BomoEE10012_complete:A_BomoEE_comp63851_c0_seq1
100bp
15 O_BomoEE10013_complete:A_BomoEE_comp63853_c0_seq3
155bp
 PREDICTED:_sodium_channel_protein_Nach-like_[Bombyx_mori]
16 O_BomoEE10014_5prime_partial:A_BomoEE_comp63854_c0_seq1
1075bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0010091 P trichome branching
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042023 P DNA endoreduplication
GO:0042787 P ubiquitin-dependent protein catabolic process
17 O_BomoEE10015_complete:A_BomoEE_comp63854_c0_seq1
186bp
18 O_BomoEE10016_complete:A_BomoEE_comp63854_c0_seq1
148bp
19 O_BomoEE10017_complete:A_BomoEE_comp63854_c0_seq1
147bp
20 O_BomoEE10018_complete:A_BomoEE_comp63854_c0_seq1
125bp
21 O_BomoEE10019_5prime_partial:A_BomoEE_comp63854_c0_seq2
1081bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0010091 P trichome branching
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042023 P DNA endoreduplication
GO:0042787 P ubiquitin-dependent protein catabolic process
22 O_BomoEE1001_3prime_partial:A_BomoEE_comp22184_c0_seq1
199bp
 PREDICTED:_uncharacterized_protein_LOC101746930_isoform_X3_[Bombyx_mori]
23 O_BomoEE10020_complete:A_BomoEE_comp63854_c0_seq2
192bp
24 O_BomoEE10021_complete:A_BomoEE_comp63854_c0_seq2
148bp
25 O_BomoEE10022_complete:A_BomoEE_comp63854_c0_seq2
147bp
26 O_BomoEE10023_complete:A_BomoEE_comp63854_c0_seq2
125bp
27 O_BomoEE10024_5prime_partial:A_BomoEE_comp63854_c0_seq3
1071bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0010091 P trichome branching
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042023 P DNA endoreduplication
GO:0042787 P ubiquitin-dependent protein catabolic process
28 O_BomoEE10025_complete:A_BomoEE_comp63854_c0_seq3
186bp
29 O_BomoEE10026_complete:A_BomoEE_comp63854_c0_seq3
148bp
30 O_BomoEE10027_complete:A_BomoEE_comp63854_c0_seq3
147bp
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