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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3301 O_SariMSG12972_complete:A_SariMSG_c25500_g1_i1
224bp
non-structural_maintenance_of_chromosomes_element_3_homolog_[Helicoverpa_armigera]
GO:0000781 C chromosome, telomeric region
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016925 P protein sumoylation
GO:0030915 C Smc5-Smc6 complex
GO:0031398 P positive regulation of protein ubiquitination
GO:0040008 P regulation of growth
3302 O_SariMSG12973_complete:A_SariMSG_c25501_g1_i1
137bp
uncharacterized_protein_C9orf85_homolog_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3303 O_SariMSG12974_3prime_partial:A_SariMSG_c25501_g1_i2
149bp
uncharacterized_protein_C9orf85_homolog_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3304 O_SariMSG12975_5prime_partial:A_SariMSG_c25503_g1_i1
4070bp
PREDICTED:_basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein_isoform_X4_[Papilio_machaon]
GO:0001523 P retinoid metabolic process
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006027 P glycosaminoglycan catabolic process
GO:0008022 F protein C-terminus binding
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030203 P glycosaminoglycan metabolic process
GO:0031012 C extracellular matrix
GO:0042157 P lipoprotein metabolic process
GO:0043202 C lysosomal lumen
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
3305 O_SariMSG12976_complete:A_SariMSG_c25503_g1_i1
213bp
3306 O_SariMSG12977_complete:A_SariMSG_c25503_g1_i1
154bp
3307 O_SariMSG12978_complete:A_SariMSG_c25503_g1_i1
120bp
3308 O_SariMSG12979_complete:A_SariMSG_c25503_g1_i1
116bp
3309 O_SariMSG1297_internal:A_SariMSG_c6347_g1_i1
164bp
LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
3310 O_SariMSG12980_complete:A_SariMSG_c25503_g1_i1
114bp
3311 O_SariMSG12981_complete:A_SariMSG_c25503_g1_i1
106bp
3312 O_SariMSG12982_5prime_partial:A_SariMSG_c25503_g1_i2
4183bp
PREDICTED:_basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein_isoform_X4_[Papilio_machaon]
GO:0001523 P retinoid metabolic process
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006027 P glycosaminoglycan catabolic process
GO:0008022 F protein C-terminus binding
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030203 P glycosaminoglycan metabolic process
GO:0031012 C extracellular matrix
GO:0042157 P lipoprotein metabolic process
GO:0043202 C lysosomal lumen
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
3313 O_SariMSG12983_complete:A_SariMSG_c25503_g1_i2
254bp
3314 O_SariMSG12984_complete:A_SariMSG_c25503_g1_i2
154bp
3315 O_SariMSG12985_complete:A_SariMSG_c25503_g1_i2
134bp
3316 O_SariMSG12986_complete:A_SariMSG_c25503_g1_i2
120bp
3317 O_SariMSG12987_complete:A_SariMSG_c25503_g1_i2
116bp
3318 O_SariMSG12988_complete:A_SariMSG_c25503_g1_i2
114bp
3319 O_SariMSG12989_complete:A_SariMSG_c25503_g1_i2
106bp
3320 O_SariMSG1298_internal:A_SariMSG_c6347_g1_i1
164bp
3321 O_SariMSG12990_5prime_partial:A_SariMSG_c25503_g1_i3
4034bp
PREDICTED:_basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein_isoform_X4_[Papilio_machaon]
GO:0001523 P retinoid metabolic process
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006027 P glycosaminoglycan catabolic process
GO:0008022 F protein C-terminus binding
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030203 P glycosaminoglycan metabolic process
GO:0031012 C extracellular matrix
GO:0042157 P lipoprotein metabolic process
GO:0043202 C lysosomal lumen
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
3322 O_SariMSG12991_complete:A_SariMSG_c25503_g1_i3
282bp
3323 O_SariMSG12992_complete:A_SariMSG_c25503_g1_i3
154bp
3324 O_SariMSG12993_complete:A_SariMSG_c25503_g1_i3
120bp
3325 O_SariMSG12994_complete:A_SariMSG_c25503_g1_i3
116bp
3326 O_SariMSG12995_complete:A_SariMSG_c25503_g1_i3
114bp
3327 O_SariMSG12996_complete:A_SariMSG_c25503_g1_i3
106bp
3328 O_SariMSG12997_5prime_partial:A_SariMSG_c25503_g1_i4
3991bp
PREDICTED:_basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein_isoform_X4_[Papilio_machaon]
GO:0001523 P retinoid metabolic process
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006027 P glycosaminoglycan catabolic process
GO:0008022 F protein C-terminus binding
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030203 P glycosaminoglycan metabolic process
GO:0031012 C extracellular matrix
GO:0042157 P lipoprotein metabolic process
GO:0043202 C lysosomal lumen
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
3329 O_SariMSG12998_complete:A_SariMSG_c25503_g1_i4
282bp
3330 O_SariMSG12999_complete:A_SariMSG_c25503_g1_i4
154bp
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