SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/33287
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7711 O_SariASG16941_complete:A_SariASG_c39026_g1_i4
228bp
uncharacterized_protein_LOC101738535_isoform_X2_[Bombyx_mori]
7712 O_SariASG16942_complete:A_SariASG_c39026_g1_i4
122bp
7713 O_SariASG16943_complete:A_SariASG_c39026_g1_i5
228bp
uncharacterized_protein_LOC101738535_isoform_X2_[Bombyx_mori]
7714 O_SariASG16944_5prime_partial:A_SariASG_c39026_g1_i5
161bp
hypothetical_protein_KGM_200716_[Danaus_plexippus_plexippus]
7715 O_SariASG16945_complete:A_SariASG_c39026_g1_i5
122bp
7716 O_SariASG16946_complete:A_SariASG_c39027_g2_i1
142bp
7717 O_SariASG16947_complete:A_SariASG_c39027_g2_i2
116bp
7718 O_SariASG16948_5prime_partial:A_SariASG_c39027_g4_i1
182bp
PREDICTED:_zinc_finger_protein_62-like_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7719 O_SariASG16949_complete:A_SariASG_c39027_g2_i3
116bp
7720 O_SariASG1694_complete:A_SariASG_c16494_g1_i1
1117bp
hypothetical_protein_2_-_cabbage_looper_transposon_TED_(fragment)
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
7721 O_SariASG16950_complete:A_SariASG_c39027_g2_i4
110bp
7722 O_SariASG16951_complete:A_SariASG_c39027_g2_i5
142bp
7723 O_SariASG16952_complete:A_SariASG_c39027_g2_i6
110bp
7724 O_SariASG16953_3prime_partial:A_SariASG_c39027_g7_i1
210bp
zinc_finger_protein_235-like_[Helicoverpa_armigera]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0010564 P regulation of cell cycle process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0040008 P regulation of growth
GO:0046872 F metal ion binding
GO:0051301 P cell division
7725 O_SariASG16954_3prime_partial:A_SariASG_c39027_g7_i2
210bp
zinc_finger_protein_235-like_[Helicoverpa_armigera]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0010564 P regulation of cell cycle process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0040008 P regulation of growth
GO:0046872 F metal ion binding
GO:0051301 P cell division
7726 O_SariASG16955_5prime_partial:A_SariASG_c39028_g2_i2
634bp
uncharacterized_protein_LOC110378126_[Helicoverpa_armigera]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7727 O_SariASG16956_complete:A_SariASG_c39028_g2_i2
121bp
7728 O_SariASG16957_complete:A_SariASG_c39028_g2_i3
211bp
uncharacterized_protein_LOC110378126_[Helicoverpa_armigera]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7729 O_SariASG16958_complete:A_SariASG_c39029_g1_i2
288bp
uncharacterized_protein_LOC110384571_[Helicoverpa_armigera]
7730 O_SariASG16959_complete:A_SariASG_c39031_g1_i1
894bp
MOG_interacting_and_ectopic_P-granules_protein_1_[Bombyx_mori]
GO:0002119 P nematode larval development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0007506 P gonadal mesoderm development
GO:0007548 P sex differentiation
GO:0008134 F transcription factor binding
GO:0008406 P gonad development
GO:0010468 P regulation of gene expression
GO:0017151 F DEAD/H-box RNA helicase binding
GO:0030154 P cell differentiation
GO:0040025 P vulval development
GO:0040035 P hermaphrodite genitalia development
GO:0042802 F identical protein binding
GO:0042826 F histone deacetylase binding
GO:0046872 F metal ion binding
GO:0048599 P oocyte development
7731 O_SariASG1695_complete:A_SariASG_c16494_g1_i1
579bp
PREDICTED:_uncharacterized_protein_LOC105387226_[Plutella_xylostella]
7732 O_SariASG16960_complete:A_SariASG_c39031_g1_i2
886bp
MOG_interacting_and_ectopic_P-granules_protein_1_[Bombyx_mori]
GO:0002119 P nematode larval development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0007506 P gonadal mesoderm development
GO:0007548 P sex differentiation
GO:0008134 F transcription factor binding
GO:0008406 P gonad development
GO:0010468 P regulation of gene expression
GO:0017151 F DEAD/H-box RNA helicase binding
GO:0030154 P cell differentiation
GO:0040025 P vulval development
GO:0040035 P hermaphrodite genitalia development
GO:0042802 F identical protein binding
GO:0042826 F histone deacetylase binding
GO:0046872 F metal ion binding
GO:0048599 P oocyte development
7733 O_SariASG16961_complete:A_SariASG_c39035_g1_i1
9552bp
PREDICTED:_uncharacterized_protein_LOC106119215_[Papilio_xuthus]
GO:0000226 P microtubule cytoskeleton organization
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005604 C basement membrane
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007010 P cytoskeleton organization
GO:0007050 P regulation of cell cycle
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008022 F protein C-terminus binding
GO:0008092 F cytoskeletal protein binding
GO:0009611 P response to wounding
GO:0009925 C basal plasma membrane
GO:0015629 C actin cytoskeleton
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0030011 P maintenance of cell polarity
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030424 C axon
GO:0031252 C cell leading edge
GO:0031581 P hemidesmosome assembly
GO:0031673 C H zone
GO:0035371 C microtubule plus-end
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045104 P intermediate filament cytoskeleton organization
GO:0045111 C intermediate filament cytoskeleton
GO:0046872 F metal ion binding
GO:0048870 P cell motility
GO:0051010 F microtubule plus-end binding
GO:0070062 C extracellular exosome
7734 O_SariASG16962_complete:A_SariASG_c39035_g1_i1
255bp
7735 O_SariASG16963_complete:A_SariASG_c39035_g1_i1
209bp
7736 O_SariASG16964_complete:A_SariASG_c39035_g1_i1
205bp
hypothetical_protein_ALC62_00976_[Cyphomyrmex_costatus]
7737 O_SariASG16965_complete:A_SariASG_c39035_g1_i1
178bp
7738 O_SariASG16966_complete:A_SariASG_c39035_g1_i1
162bp
7739 O_SariASG16967_complete:A_SariASG_c39035_g1_i1
148bp
7740 O_SariASG16968_complete:A_SariASG_c39035_g1_i1
145bp
previous next from show/33287

- SilkBase 1999-2023 -