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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4411 O_SariASG13971_complete:A_SariASG_c37696_g1_i2
1353bp
thyroid_receptor-interacting_protein_11_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0000139 C Golgi membrane
GO:0002079 C inner acrosomal membrane
GO:0002080 C acrosomal membrane
GO:0002081 C outer acrosomal membrane
GO:0003281 P ventricular septum development
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0005856 C cytoskeleton
GO:0006366 P transcription by RNA polymerase II
GO:0016020 C membrane
GO:0030133 C transport vesicle
GO:1903506 P regulation of nucleic acid-templated transcription
4412 O_SariASG13972_complete:A_SariASG_c37697_g1_i1
1088bp
cyclin_dependent_kinase_12_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006468 P protein phosphorylation
GO:0006909 P phagocytosis
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019908 C nuclear cyclin-dependent protein kinase holoenzyme complex
GO:0022008 P neurogenesis
GO:0030332 F cyclin binding
GO:0040018 P positive regulation of multicellular organism growth
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0051726 P regulation of cell cycle
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
GO:0090277 P positive regulation of peptide hormone secretion
4413 O_SariASG13973_complete:A_SariASG_c37697_g1_i1
231bp
4414 O_SariASG13974_complete:A_SariASG_c37697_g1_i1
102bp
4415 O_SariASG13975_5prime_partial:A_SariASG_c37697_g1_i2
198bp
Cyclin-dependent_kinase_12_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006468 P protein phosphorylation
GO:0006909 P phagocytosis
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019908 C nuclear cyclin-dependent protein kinase holoenzyme complex
GO:0022008 P neurogenesis
GO:0030332 F cyclin binding
GO:0040018 P positive regulation of multicellular organism growth
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0051726 P regulation of cell cycle
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
GO:0090277 P positive regulation of peptide hormone secretion
4416 O_SariASG13976_internal:A_SariASG_c37698_g1_i1
445bp
rab_GTPase-activating_protein_1-like_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0043547 P positive regulation of GTPase activity
4417 O_SariASG13977_3prime_partial:A_SariASG_c37698_g1_i2
527bp
PREDICTED:_rab_GTPase-activating_protein_1-like_isoform_X1_[Papilio_xuthus]
GO:0003677 F DNA binding
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0006886 P intracellular protein transport
GO:0007049 P cell cycle
GO:0012505 C endomembrane system
GO:0015631 F tubulin binding
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0090630 P activation of GTPase activity
GO:1902017 P regulation of cilium assembly
4418 O_SariASG13978_complete:A_SariASG_c37698_g1_i2
102bp
4419 O_SariASG13979_3prime_partial:A_SariASG_c37698_g1_i3
532bp
PREDICTED:_rab_GTPase-activating_protein_1-like_isoform_X1_[Papilio_xuthus]
GO:0003677 F DNA binding
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0043547 P positive regulation of GTPase activity
4420 O_SariASG1397_5prime_partial:A_SariASG_c12953_g1_i1
126bp
4421 O_SariASG13980_complete:A_SariASG_c37698_g1_i3
102bp
4422 O_SariASG13981_5prime_partial:A_SariASG_c37698_g2_i1
614bp
LOW_QUALITY_PROTEIN:_rab_GTPase-activating_protein_1-like_[Helicoverpa_armigera]
GO:0005096 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006886 P intracellular protein transport
GO:0007049 P cell cycle
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0043547 P positive regulation of GTPase activity
GO:0090630 P activation of GTPase activity
4423 O_SariASG13982_3prime_partial:A_SariASG_c37698_g1_i4
422bp
rab_GTPase-activating_protein_1-like_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0006886 P intracellular protein transport
GO:0007049 P cell cycle
GO:0012505 C endomembrane system
GO:0015631 F tubulin binding
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0090630 P activation of GTPase activity
GO:1902017 P regulation of cilium assembly
4424 O_SariASG13983_internal:A_SariASG_c37699_g1_i1
245bp
PREDICTED:_uncharacterized_protein_LOC106710892_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4425 O_SariASG13984_internal:A_SariASG_c37699_g1_i3
199bp
PREDICTED:_uncharacterized_protein_LOC106710892_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4426 O_SariASG13985_internal:A_SariASG_c37699_g1_i4
183bp
PREDICTED:_uncharacterized_protein_LOC106710892_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4427 O_SariASG13986_5prime_partial:A_SariASG_c37702_g1_i1
128bp
uncharacterized_protein_C630.12_[Helicoverpa_armigera]
4428 O_SariASG13987_3prime_partial:A_SariASG_c37702_g2_i1
230bp
PREDICTED:_metallophosphoesterase_1_[Amyelois_transitella]
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0006506 P GPI anchor biosynthetic process
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008081 F phosphoric diester hydrolase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0034235 F GPI anchor binding
GO:0046872 F metal ion binding
GO:0070971 C endoplasmic reticulum exit site
4429 O_SariASG13988_internal:A_SariASG_c37704_g1_i1
296bp
HMG_box-containing_protein_C19G7.04-like_[Helicoverpa_armigera]
GO:0005634 C nucleus
4430 O_SariASG13989_internal:A_SariASG_c37704_g1_i2
230bp
HMG_box-containing_protein_C19G7.04-like_[Helicoverpa_armigera]
GO:0005634 C nucleus
4431 O_SariASG1398_5prime_partial:A_SariASG_c12953_g1_i1
120bp
lipoma-preferred_partner_homolog_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0008270 F zinc ion binding
GO:0030054 C cell junction
GO:0046872 F metal ion binding
4432 O_SariASG13990_internal:A_SariASG_c37704_g1_i3
256bp
HMG_box-containing_protein_C19G7.04-like_[Helicoverpa_armigera]
GO:0005634 C nucleus
4433 O_SariASG13991_internal:A_SariASG_c37706_g2_i1
360bp
uncharacterized_protein_LOC105841651_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0000784 C chromosome, telomeric region
GO:0001756 P somitogenesis
GO:0001933 P negative regulation of protein phosphorylation
GO:0002326 P B cell lineage commitment
GO:0002328 P pro-B cell differentiation
GO:0002360 P T cell lineage commitment
GO:0002377 P immunoglobulin production
GO:0002638 P negative regulation of immunoglobulin production
GO:0002684 P positive regulation of immune system process
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004677 F DNA-dependent protein kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005730 C nucleolus
GO:0005829 C cytosol
GO:0005958 C DNA-dependent protein kinase-DNA ligase 4 complex
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006464 P cellular protein modification process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007420 P brain development
GO:0007507 P heart development
GO:0008134 F transcription factor binding
GO:0008283 P cell population proliferation
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0010212 P response to ionizing radiation
GO:0010332 P response to gamma radiation
GO:0014823 P response to activity
GO:0016020 C membrane
GO:0016233 P telomere capping
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0018105 P peptidyl-serine phosphorylation
GO:0019899 F enzyme binding
GO:0030098 P lymphocyte differentiation
GO:0031648 P protein destabilization
GO:0032481 P positive regulation of type I interferon production
GO:0032869 P cellular response to insulin stimulus
GO:0033077 P T cell differentiation in thymus
GO:0033151 P V(D)J recombination
GO:0033152 P immunoglobulin V(D)J recombination
GO:0033153 P T cell receptor V(D)J recombination
GO:0035234 P ectopic germ cell programmed cell death
GO:0042752 P regulation of circadian rhythm
GO:0043065 P positive regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048146 P positive regulation of fibroblast proliferation
GO:0048511 P rhythmic process
GO:0048536 P spleen development
GO:0048538 P thymus development
GO:0048639 P positive regulation of developmental growth
GO:0048660 P regulation of smooth muscle cell proliferation
GO:0070419 C nonhomologous end joining complex
GO:0072431 P mitotic G1 DNA damage checkpoint signaling
GO:0097681 P double-strand break repair via alternative nonhomologous end joining
GO:2000773 P negative regulation of cellular senescence
GO:2001229 P negative regulation of response to gamma radiation
4434 O_SariASG13992_internal:A_SariASG_c37706_g3_i1
426bp
PREDICTED:_uncharacterized_protein_LOC105394415,_partial_[Plutella_xylostella]
4435 O_SariASG13993_internal:A_SariASG_c37709_g1_i1
100bp
PREDICTED:_spastin-like_[Papilio_polytes]
4436 O_SariASG13994_5prime_partial:A_SariASG_c37709_g1_i2
151bp
spastin_isoform_X3_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007079 P mitotic chromosome movement towards spindle pole
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0008344 P adult locomotory behavior
GO:0008568 F microtubule-severing ATPase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030154 P cell differentiation
GO:0031117 P positive regulation of microtubule depolymerization
GO:0034214 P protein hexamerization
GO:0050803 P regulation of synapse structure or activity
GO:0051013 P microtubule severing
GO:0051301 P cell division
4437 O_SariASG13995_internal:A_SariASG_c37709_g1_i3
226bp
spastin_isoform_X2_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007079 P mitotic chromosome movement towards spindle pole
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0008344 P adult locomotory behavior
GO:0008568 F microtubule-severing ATPase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030154 P cell differentiation
GO:0031117 P positive regulation of microtubule depolymerization
GO:0034214 P protein hexamerization
GO:0050803 P regulation of synapse structure or activity
GO:0051013 P microtubule severing
GO:0051301 P cell division
4438 O_SariASG13996_complete:A_SariASG_c37710_g1_i1
291bp
PREDICTED:_uncharacterized_protein_LOC106125909_[Papilio_xuthus]
4439 O_SariASG13997_3prime_partial:A_SariASG_c37710_g1_i1
149bp
4440 O_SariASG13998_complete:A_SariASG_c37710_g1_i1
124bp
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