Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2101	O_SariASG11892_5prime_partial:A_SariASG_c36487_g1_i1 135bp
2102	O_SariASG11893_3prime_partial:A_SariASG_c36487_g1_i3 158bp		probable_ATP-dependent_RNA_helicase_DDX52_[Helicoverpa_armigera]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0006364 P rRNA processing GO:0010501 P RNA secondary structure unwinding GO:0016787 F hydrolase activity
2103	O_SariASG11894_5prime_partial:A_SariASG_c36487_g1_i3 135bp
2104	O_SariASG11895_complete:A_SariASG_c36487_g1_i4 413bp		probable_ATP-dependent_RNA_helicase_DDX52_[Helicoverpa_armigera]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0006364 P rRNA processing GO:0010501 P RNA secondary structure unwinding GO:0016020 C membrane GO:0016787 F hydrolase activity GO:0044822 F RNA binding
2105	O_SariASG11896_complete:A_SariASG_c36487_g1_i4 100bp
2106	O_SariASG11897_3prime_partial:A_SariASG_c36487_g1_i5 604bp		probable_ATP-dependent_RNA_helicase_DDX52_[Helicoverpa_armigera]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0006364 P rRNA processing GO:0010501 P RNA secondary structure unwinding GO:0016020 C membrane GO:0016787 F hydrolase activity GO:0044822 F RNA binding
2107	O_SariASG11898_5prime_partial:A_SariASG_c36487_g1_i5 135bp
2108	O_SariASG11899_complete:A_SariASG_c36487_g1_i5 100bp
2109	O_SariASG1189_5prime_partial:A_SariASG_c10930_g1_i1 146bp		PREDICTED:_uncharacterized_protein_LOC106099582_[Papilio_polytes]
2110	O_SariASG118_complete:A_SariASG_c788_g1_i1 517bp		ATP-dependent_RNA_helicase_DBP2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000381 P regulation of alternative mRNA splicing, via spliceosome GO:0000398 P mRNA splicing, via spliceosome GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0003729 F mRNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005700 C polytene chromosome GO:0005703 C polytene chromosome puff GO:0005737 C cytoplasm GO:0005875 C microtubule associated complex GO:0006417 P regulation of translation GO:0010501 P RNA secondary structure unwinding GO:0016246 P RNA interference GO:0016787 F hydrolase activity GO:0019730 P antimicrobial humoral response GO:0022008 P neurogenesis GO:0031047 P gene silencing by RNA GO:0045893 P positive regulation of transcription, DNA-templated GO:0050688 P regulation of defense response to virus GO:0071011 C precatalytic spliceosome GO:0071013 C catalytic step 2 spliceosome
2111	O_SariASG11900_complete:A_SariASG_c36489_g2_i1 209bp		uncharacterized_protein_LOC101741301_[Bombyx_mori]	GO:0070301 P cellular response to hydrogen peroxide
2112	O_SariASG11901_complete:A_SariASG_c36489_g2_i2 209bp		uncharacterized_protein_LOC101741301_[Bombyx_mori]	GO:0070301 P cellular response to hydrogen peroxide
2113	O_SariASG11902_complete:A_SariASG_c36489_g2_i3 209bp		uncharacterized_protein_LOC101741301_[Bombyx_mori]	GO:0070301 P cellular response to hydrogen peroxide
2114	O_SariASG11903_internal:A_SariASG_c36495_g1_i1 323bp		G2/M_phase-specific_E3_ubiquitin-protein_ligase_[Bombyx_mori]	GO:0004842 F ubiquitin-protein transferase activity GO:0005634 C nucleus GO:0005730 C nucleolus GO:0005737 C cytoplasm GO:0006915 P apoptotic process GO:0007275 P multicellular organism development GO:0008270 F zinc ion binding GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0046872 F metal ion binding
2115	O_SariASG11904_complete:A_SariASG_c36495_g1_i1 123bp
2116	O_SariASG11905_3prime_partial:A_SariASG_c36495_g1_i2 564bp		G2/M_phase-specific_E3_ubiquitin-protein_ligase_[Bombyx_mori]	GO:0000209 P protein polyubiquitination GO:0001824 P blastocyst development GO:0004842 F ubiquitin-protein transferase activity GO:0005634 C nucleus GO:0005730 C nucleolus GO:0005737 C cytoplasm GO:0006915 P apoptotic process GO:0007275 P multicellular organism development GO:0008270 F zinc ion binding GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0046872 F metal ion binding GO:0061630 F ubiquitin protein ligase activity GO:2001243 P negative regulation of intrinsic apoptotic signaling pathway
2117	O_SariASG11906_complete:A_SariASG_c36495_g1_i2 123bp
2118	O_SariASG11907_3prime_partial:A_SariASG_c36495_g1_i3 490bp		G2/M_phase-specific_E3_ubiquitin-protein_ligase_[Bombyx_mori]	GO:0000209 P protein polyubiquitination GO:0001824 P blastocyst development GO:0004842 F ubiquitin-protein transferase activity GO:0005634 C nucleus GO:0005730 C nucleolus GO:0005737 C cytoplasm GO:0006915 P apoptotic process GO:0007275 P multicellular organism development GO:0008270 F zinc ion binding GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0046872 F metal ion binding GO:0061630 F ubiquitin protein ligase activity GO:2001243 P negative regulation of intrinsic apoptotic signaling pathway
2119	O_SariASG11908_5prime_partial:A_SariASG_c36495_g1_i3 113bp
2120	O_SariASG11909_complete:A_SariASG_c36496_g1_i1 387bp		PREDICTED:_protein_DDI1_homolog_2_[Amyelois_transitella]	GO:0004190 F aspartic-type endopeptidase activity GO:0006508 P proteolysis
2121	O_SariASG1190_internal:A_SariASG_c10931_g1_i1 138bp
2122	O_SariASG11910_complete:A_SariASG_c36496_g1_i1 106bp		hypothetical_protein_DL89DRAFT_22945_[Linderina_pennispora]
2123	O_SariASG11911_internal:A_SariASG_c36497_g1_i1 302bp		Usher_syndrome_type-1G_protein_homolog_[Bombyx_mori]	GO:0001917 C photoreceptor inner segment GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0005856 C cytoskeleton GO:0005886 C plasma membrane GO:0007605 P sensory perception of sound GO:0015629 C actin cytoskeleton GO:0016020 C membrane GO:0030507 F spectrin binding GO:0032391 C photoreceptor connecting cilium GO:0036064 C ciliary basal body GO:0042472 P inner ear morphogenesis GO:0042803 F protein homodimerization activity GO:0045494 P photoreceptor cell maintenance GO:0050953 P sensory perception of light stimulus GO:0050957 P equilibrioception GO:0060113 P inner ear receptor cell differentiation GO:0060122 P inner ear receptor cell stereocilium organization
2124	O_SariASG11912_5prime_partial:A_SariASG_c36497_g1_i1 132bp
2125	O_SariASG11913_internal:A_SariASG_c36497_g1_i2 217bp		Usher_syndrome_type-1G_protein_homolog_[Bombyx_mori]
2126	O_SariASG11914_5prime_partial:A_SariASG_c36497_g1_i2 132bp
2127	O_SariASG11915_complete:A_SariASG_c36498_g1_i1 489bp		zinc_finger_C2HC_domain-containing_protein_1C_isoform_X4_[Bombyx_mori]	GO:0046872 F metal ion binding
2128	O_SariASG11916_complete:A_SariASG_c36498_g1_i1 171bp
2129	O_SariASG11917_complete:A_SariASG_c36498_g1_i1 116bp
2130	O_SariASG11918_complete:A_SariASG_c36499_g1_i2 386bp		farnesyl_diphosphate_synthase_3_isoform_X1_[Bombyx_mori]	GO:0004161 F dimethylallyltranstransferase activity GO:0004337 F geranyltranstransferase activity GO:0005737 C cytoplasm GO:0006629 P lipid metabolic process GO:0006694 P steroid biosynthetic process GO:0006695 P cholesterol biosynthetic process GO:0008202 P steroid metabolic process GO:0008203 P cholesterol metabolic process GO:0008299 P isoprenoid biosynthetic process GO:0016126 P sterol biosynthetic process GO:0016740 F transferase activity GO:0033384 P geranyl diphosphate biosynthetic process GO:0045337 P farnesyl diphosphate biosynthetic process GO:0046872 F metal ion binding