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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

next from show/33287
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1 O_SariASG10000_3prime_partial:A_SariASG_c35056_g1_i2
133bp
tau-tubulin_kinase_1_[Helicoverpa_armigera]
2 O_SariASG10001_5prime_partial:A_SariASG_c35056_g1_i2
108bp
3 O_SariASG10002_internal:A_SariASG_c35056_g1_i3
319bp
tau-tubulin_kinase_homolog_Asator_isoform_X3_[Bombyx_mori]
4 O_SariASG10003_5prime_partial:A_SariASG_c35056_g1_i3
108bp
5 O_SariASG10004_complete:A_SariASG_c35057_g1_i1
119bp
PREDICTED:_inaD-like_protein_isoform_X3_[Papilio_polytes]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0030054 C cell junction
GO:0035556 P intracellular signal transduction
GO:0043234 C protein-containing complex
GO:0045177 C apical part of cell
GO:0048471 C perinuclear region of cytoplasm
GO:0070062 C extracellular exosome
GO:0070830 P bicellular tight junction assembly
6 O_SariASG10005_5prime_partial:A_SariASG_c35062_g1_i1
125bp
7 O_SariASG10006_complete:A_SariASG_c35064_g1_i1
212bp
PREDICTED:_DNA-binding_protein_Ewg_isoform_X1_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
8 O_SariASG10007_complete:A_SariASG_c35064_g1_i2
451bp
PREDICTED:_DNA-binding_protein_Ewg_isoform_X2_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
9 O_SariASG10008_complete:A_SariASG_c35064_g1_i2
103bp
10 O_SariASG10009_3prime_partial:A_SariASG_c35064_g1_i3
230bp
PREDICTED:_DNA-binding_protein_Ewg_isoform_X1_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
11 O_SariASG1000_3prime_partial:A_SariASG_c8879_g1_i1
379bp
PREDICTED:_phosphoribosyl_pyrophosphate_synthase-associated_protein_2_isoform_X2_[Amyelois_transitella]
GO:0000287 F magnesium ion binding
GO:0002189 C ribose phosphate diphosphokinase complex
GO:0004749 F ribose phosphate diphosphokinase activity
GO:0009165 P nucleotide biosynthetic process
GO:0043234 C protein-containing complex
GO:0060348 P bone development
12 O_SariASG10010_complete:A_SariASG_c35064_g1_i3
114bp
13 O_SariASG10011_complete:A_SariASG_c35064_g1_i4
186bp
PREDICTED:_DNA-binding_protein_Ewg_isoform_X1_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007417 P central nervous system development
GO:0007517 P muscle organ development
GO:0007560 P imaginal disc morphogenesis
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
14 O_SariASG10012_complete:A_SariASG_c35064_g1_i4
103bp
15 O_SariASG10013_complete:A_SariASG_c35064_g1_i4
102bp
16 O_SariASG10014_complete:A_SariASG_c35064_g1_i5
145bp
17 O_SariASG10015_complete:A_SariASG_c35064_g1_i6
451bp
PREDICTED:_DNA-binding_protein_Ewg_isoform_X2_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
18 O_SariASG10016_complete:A_SariASG_c35064_g1_i6
103bp
19 O_SariASG10017_internal:A_SariASG_c35066_g1_i1
140bp
PREDICTED:_26S_proteasome_non-ATPase_regulatory_subunit_5_[Amyelois_transitella]
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0022624 C proteasome accessory complex
GO:0043248 P proteasome assembly
GO:0070682 P proteasome regulatory particle assembly
20 O_SariASG10018_internal:A_SariASG_c35066_g1_i3
534bp
PREDICTED:_26S_proteasome_non-ATPase_regulatory_subunit_5_[Amyelois_transitella]
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0022624 C proteasome accessory complex
GO:0043248 P proteasome assembly
GO:0070682 P proteasome regulatory particle assembly
21 O_SariASG10019_complete:A_SariASG_c35067_g1_i1
1455bp
WD_repeat-containing_protein_7_[Helicoverpa_armigera]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005737 C cytoplasm
GO:0008021 C synaptic vesicle
22 O_SariASG1001_3prime_partial:A_SariASG_c8879_g1_i2
360bp
PREDICTED:_phosphoribosyl_pyrophosphate_synthase-associated_protein_2_isoform_X2_[Amyelois_transitella]
GO:0000287 F magnesium ion binding
GO:0002189 C ribose phosphate diphosphokinase complex
GO:0004749 F ribose phosphate diphosphokinase activity
GO:0009165 P nucleotide biosynthetic process
GO:0043234 C protein-containing complex
GO:0060348 P bone development
23 O_SariASG10020_complete:A_SariASG_c35067_g1_i2
1455bp
WD_repeat-containing_protein_7_[Helicoverpa_armigera]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005737 C cytoplasm
GO:0008021 C synaptic vesicle
24 O_SariASG10021_complete:A_SariASG_c35067_g1_i4
1455bp
WD_repeat-containing_protein_7_[Helicoverpa_armigera]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005737 C cytoplasm
GO:0008021 C synaptic vesicle
25 O_SariASG10022_internal:A_SariASG_c35070_g1_i1
316bp
neuralized-like_protein_4_[Bombyx_mori]
26 O_SariASG10023_complete:A_SariASG_c35070_g1_i1
174bp
27 O_SariASG10024_5prime_partial:A_SariASG_c35070_g2_i3
167bp
neuralized-like_protein_4_[Bombyx_mori]
28 O_SariASG10025_5prime_partial:A_SariASG_c35071_g1_i1
302bp
coatomer_subunit_epsilon_[Helicoverpa_armigera]
GO:0000139 C Golgi membrane
GO:0005198 F structural molecule activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030126 C COPI vesicle coat
GO:0030137 C COPI-coated vesicle
GO:0030663 C COPI-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
29 O_SariASG10026_5prime_partial:A_SariASG_c35071_g1_i2
307bp
coatomer_subunit_epsilon_[Helicoverpa_armigera]
GO:0000139 C Golgi membrane
GO:0005198 F structural molecule activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030126 C COPI vesicle coat
GO:0030137 C COPI-coated vesicle
GO:0030663 C COPI-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
30 O_SariASG10027_internal:A_SariASG_c35075_g1_i1
255bp
Fanconi_anemia_group_D2_protein_[Helicoverpa_armigera]
GO:0000793 C condensed chromosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007129 P homologous chromosome pairing at meiosis
GO:0007276 P gamete generation
GO:0010332 P response to gamma radiation
GO:0036297 P interstrand cross-link repair
GO:0070182 F DNA polymerase binding
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