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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4081 O_BomaMSG13674_complete:A_BomaMSG_c23112_g1_i1
380bp
uncharacterized_protein_LOC101742132_isoform_X2_[Bombyx_mori]
4082 O_BomaMSG13675_5prime_partial:A_BomaMSG_c23113_g1_i1
374bp
interleukin_enhancer_binding_factor_isoform_X1_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006955 P immune response
GO:0016740 F transferase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
4083 O_BomaMSG13676_complete:A_BomaMSG_c23113_g1_i2
389bp
interleukin_enhancer_binding_factor_isoform_X1_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006955 P immune response
GO:0016740 F transferase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
4084 O_BomaMSG13677_complete:A_BomaMSG_c23114_g1_i1
489bp
tetratricopeptide_repeat_protein_14_homolog_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
4085 O_BomaMSG13678_complete:A_BomaMSG_c23114_g1_i2
250bp
tetratricopeptide_repeat_protein_14_homolog_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
4086 O_BomaMSG13679_complete:A_BomaMSG_c23114_g1_i3
246bp
tetratricopeptide_repeat_protein_14_homolog_isoform_X4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
4087 O_BomaMSG1367_5prime_partial:A_BomaMSG_c5752_g1_i1
163bp
glycerophosphodiester_phosphodiesterase_GDPD6_isoform_X2_[Bombyx_mori]
GO:0006071 P glycerol metabolic process
GO:0006629 P lipid metabolic process
GO:0008081 F phosphoric diester hydrolase activity
GO:0008889 F glycerophosphodiester phosphodiesterase activity
GO:0016787 F hydrolase activity
4088 O_BomaMSG13680_internal:A_BomaMSG_c23115_g1_i1
182bp
transformer_2_isoform_B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000302 P response to reactive oxygen species
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0048026 P positive regulation of mRNA splicing, via spliceosome
GO:0048471 C perinuclear region of cytoplasm
4089 O_BomaMSG13681_complete:A_BomaMSG_c23115_g1_i2
273bp
transformer_2_isoform_B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000302 P response to reactive oxygen species
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0048026 P positive regulation of mRNA splicing, via spliceosome
GO:0048471 C perinuclear region of cytoplasm
4090 O_BomaMSG13682_3prime_partial:A_BomaMSG_c23115_g1_i5
285bp
transformer_2_isoform_B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000302 P response to reactive oxygen species
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0048026 P positive regulation of mRNA splicing, via spliceosome
GO:0048471 C perinuclear region of cytoplasm
4091 O_BomaMSG13683_internal:A_BomaMSG_c23116_g1_i1
134bp
integrator_complex_subunit_4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
4092 O_BomaMSG13684_5prime_partial:A_BomaMSG_c23116_g1_i1
109bp
4093 O_BomaMSG13685_internal:A_BomaMSG_c23116_g1_i2
390bp
integrator_complex_subunit_4_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
GO:0042795 P snRNA transcription by RNA polymerase II
4094 O_BomaMSG13686_5prime_partial:A_BomaMSG_c23116_g1_i2
109bp
4095 O_BomaMSG13687_complete:A_BomaMSG_c23117_g1_i2
239bp
RWD_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
4096 O_BomaMSG13688_complete:A_BomaMSG_c23117_g1_i2
108bp
4097 O_BomaMSG13689_5prime_partial:A_BomaMSG_c23118_g2_i1
121bp
4098 O_BomaMSG1368_internal:A_BomaMSG_c5765_g1_i1
246bp
kinesin-like_protein_costa_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0007228 P positive regulation of hh target transcription factor activity
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
4099 O_BomaMSG13690_5prime_partial:A_BomaMSG_c23118_g2_i1
117bp
endoplasmic_reticulum_metallopeptidase_1-like_[Bombyx_mori]
4100 O_BomaMSG13691_5prime_partial:A_BomaMSG_c23119_g1_i1
187bp
lysozyme-like_[Bombyx_mori]
GO:0003796 F lysozyme activity
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019835 P cytolysis
GO:0042742 P defense response to bacterium
4101 O_BomaMSG13692_internal:A_BomaMSG_c23120_g1_i2
310bp
uncharacterized_protein_LOC101742265_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005921 C gap junction
GO:0007049 P cell cycle
GO:0030054 C cell junction
GO:0051301 P cell division
4102 O_BomaMSG13693_internal:A_BomaMSG_c23120_g1_i3
221bp
cytospin-A-like_isoform_X6_[Helicoverpa_armigera]
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005921 C gap junction
GO:0007049 P cell cycle
GO:0030054 C cell junction
GO:0051301 P cell division
4103 O_BomaMSG13694_5prime_partial:A_BomaMSG_c23120_g1_i4
298bp
cytospin-A-like_isoform_X6_[Helicoverpa_armigera]
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005921 C gap junction
GO:0007049 P cell cycle
GO:0030054 C cell junction
GO:0051301 P cell division
4104 O_BomaMSG13695_internal:A_BomaMSG_c23122_g1_i1
105bp
putative_oxidoreductase_GLYR1_protein_[Danaus_plexippus_plexippus]
GO:0004616 F phosphogluconate dehydrogenase (decarboxylating) activity
GO:0016491 F oxidoreductase activity
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
4105 O_BomaMSG13696_3prime_partial:A_BomaMSG_c23122_g1_i2
371bp
putative_oxidoreductase_GLYR1_homolog_isoform_X2_[Bombyx_mori]
GO:0004616 F phosphogluconate dehydrogenase (decarboxylating) activity
GO:0016491 F oxidoreductase activity
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
4106 O_BomaMSG13697_complete:A_BomaMSG_c23122_g1_i2
212bp
4107 O_BomaMSG13698_3prime_partial:A_BomaMSG_c23122_g1_i3
364bp
putative_oxidoreductase_GLYR1_homolog_isoform_X1_[Bombyx_mori]
GO:0004616 F phosphogluconate dehydrogenase (decarboxylating) activity
GO:0016491 F oxidoreductase activity
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
4108 O_BomaMSG13699_complete:A_BomaMSG_c23122_g1_i3
205bp
4109 O_BomaMSG1369_internal:A_BomaMSG_c5780_g1_i1
280bp
titin_[Helicoverpa_armigera]
4110 O_BomaMSG136_internal:A_BomaMSG_c638_g1_i1
100bp
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