Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
3091	O_BomaMSG12783_complete:A_BomaMSG_c22709_g1_i2 100bp
3092	O_BomaMSG12784_3prime_partial:A_BomaMSG_c22710_g1_i1 339bp		L-threonine_dehydrogenase_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0005739 C mitochondrion GO:0006567 P threonine catabolic process GO:0008743 F L-threonine 3-dehydrogenase activity GO:0016491 F oxidoreductase activity GO:0019518 P L-threonine catabolic process to glycine GO:0050662 F obsolete coenzyme binding GO:0055114 P obsolete oxidation-reduction process
3093	O_BomaMSG12785_5prime_partial:A_BomaMSG_c22712_g3_i2 201bp		uncharacterized_protein_LOC101744657_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0042594 P response to starvation GO:0044351 P macropinocytosis
3094	O_BomaMSG12786_5prime_partial:A_BomaMSG_c22712_g3_i2 155bp
3095	O_BomaMSG12787_3prime_partial:A_BomaMSG_c22712_g3_i2 150bp
3096	O_BomaMSG12788_5prime_partial:A_BomaMSG_c22714_g1_i1 475bp		integrator_complex_subunit_6_[Bombyx_mori]	GO:0005634 C nucleus
3097	O_BomaMSG12789_complete:A_BomaMSG_c22715_g1_i1 256bp		paxillin_isoform_X2_[Bombyx_mori]	GO:0001725 C stress fiber GO:0005515 F protein binding GO:0005623 C obsolete cell GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005886 C plasma membrane GO:0005925 C focal adhesion GO:0007155 P cell adhesion GO:0007160 P cell-matrix adhesion GO:0008270 F zinc ion binding GO:0017166 F vinculin binding GO:0030054 C cell junction GO:0035994 P response to muscle stretch GO:0046872 F metal ion binding
3098	O_BomaMSG1278_internal:A_BomaMSG_c5253_g1_i1 142bp		putative_ferric-chelate_reductase_1_homolog_[Bombyx_mori]	GO:0000293 F ferric-chelate reductase activity GO:0005575 C cellular_component GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016491 F oxidoreductase activity GO:0055114 P obsolete oxidation-reduction process
3099	O_BomaMSG12790_5prime_partial:A_BomaMSG_c22715_g1_i2 361bp		paxillin_isoform_X2_[Bombyx_mori]	GO:0001725 C stress fiber GO:0005515 F protein binding GO:0005623 C obsolete cell GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005886 C plasma membrane GO:0005925 C focal adhesion GO:0007155 P cell adhesion GO:0007160 P cell-matrix adhesion GO:0008270 F zinc ion binding GO:0017166 F vinculin binding GO:0030054 C cell junction GO:0035994 P response to muscle stretch GO:0046872 F metal ion binding
3100	O_BomaMSG12791_3prime_partial:A_BomaMSG_c22715_g1_i2 105bp
3101	O_BomaMSG12792_complete:A_BomaMSG_c22716_g1_i1 100bp		LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105842701_[Bombyx_mori]
3102	O_BomaMSG12793_internal:A_BomaMSG_c22717_g1_i1 413bp		zinc_finger_protein_1_[Bombyx_mori]
3103	O_BomaMSG12794_complete:A_BomaMSG_c22717_g1_i1 137bp
3104	O_BomaMSG12795_3prime_partial:A_BomaMSG_c22720_g1_i1 158bp		mitochondrial_import_receptor_subunit_TOM22_homolog_isoform_X1_[Bombyx_mori]	GO:0005515 F protein binding GO:0005739 C mitochondrion GO:0005741 C mitochondrial outer membrane GO:0005742 C mitochondrial outer membrane translocase complex GO:0005743 C mitochondrial inner membrane GO:0006810 P transport GO:0006886 P intracellular protein transport GO:0008320 F protein transmembrane transporter activity GO:0015031 P protein transport GO:0015266 F protein transmembrane transporter activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030150 P protein import into mitochondrial matrix GO:0031307 C integral component of mitochondrial outer membrane GO:0045040 P protein insertion into mitochondrial outer membrane
3105	O_BomaMSG12796_complete:A_BomaMSG_c22720_g1_i1 122bp
3106	O_BomaMSG12797_3prime_partial:A_BomaMSG_c22721_g1_i1 282bp		lipid_storage_droplet_2-like_[Bombyx_mori]	GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005811 C lipid droplet GO:0005875 C microtubule associated complex GO:0006629 P lipid metabolic process GO:0006810 P transport GO:0006869 P lipid transport GO:0007275 P multicellular organism development GO:0007476 P imaginal disc-derived wing morphogenesis GO:0019915 P lipid storage GO:0030730 P sequestering of triglyceride GO:0031887 P lipid droplet transport along microtubule GO:0050995 P negative regulation of lipid catabolic process GO:0051049 P regulation of transport
3107	O_BomaMSG12798_5prime_partial:A_BomaMSG_c22722_g1_i1 202bp		replication_protein_A1_[Bombyx_mori]	GO:0000723 P telomere maintenance GO:0000724 P double-strand break repair via homologous recombination GO:0000784 C chromosome, telomeric region GO:0000793 C condensed chromosome GO:0000794 C condensed nuclear chromosome GO:0000800 C lateral element GO:0001673 C male germ cell nucleus GO:0001701 P in utero embryonic development GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003682 F chromatin binding GO:0003684 F damaged DNA binding GO:0003697 F single-stranded DNA binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005662 C DNA replication factor A complex GO:0006260 P DNA replication GO:0006281 P DNA repair GO:0006284 P base-excision repair GO:0006289 P nucleotide-excision repair GO:0006298 P mismatch repair GO:0006310 P DNA recombination GO:0006974 P cellular response to DNA damage stimulus GO:0007126 P meiotic cell cycle GO:0008284 P positive regulation of cell population proliferation GO:0016605 C PML body GO:0030097 P hemopoiesis GO:0046872 F metal ion binding GO:0048873 P homeostasis of number of cells within a tissue GO:0051276 P chromosome organization
3108	O_BomaMSG12799_internal:A_BomaMSG_c22722_g2_i1 158bp		replication_protein_A1_[Bombyx_mori]	GO:0000724 P double-strand break repair via homologous recombination GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003697 F single-stranded DNA binding GO:0005634 C nucleus GO:0005662 C DNA replication factor A complex GO:0006260 P DNA replication GO:0006281 P DNA repair GO:0006284 P base-excision repair GO:0006289 P nucleotide-excision repair GO:0006298 P mismatch repair GO:0006310 P DNA recombination GO:0006974 P cellular response to DNA damage stimulus GO:0016605 C PML body GO:0046872 F metal ion binding
3109	O_BomaMSG1279_internal:A_BomaMSG_c5256_g1_i1 139bp		rho_GTPase-activating_protein_21_[Bombyx_mori]
3110	O_BomaMSG127_internal:A_BomaMSG_c606_g1_i1 117bp		Ankyrin_repeat_and_sterile_alpha_motif_domain-containing_protein_1B,_partial_[Operophtera_brumata]
3111	O_BomaMSG12800_3prime_partial:A_BomaMSG_c22724_g1_i1 378bp		melanotransferrin_[Bombyx_mori]	GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005886 C plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0016020 C membrane GO:0031225 C anchored component of membrane GO:0046872 F metal ion binding GO:0055072 P iron ion homeostasis
3112	O_BomaMSG12801_internal:A_BomaMSG_c22724_g1_i2 212bp		melanotransferrin_[Bombyx_mori]	GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0006810 P transport GO:0006811 P ion transport GO:0046872 F metal ion binding GO:0055072 P iron ion homeostasis
3113	O_BomaMSG12802_internal:A_BomaMSG_c22725_g1_i1 472bp		flocculation_protein_FLO11-like_[Bombyx_mori]
3114	O_BomaMSG12803_complete:A_BomaMSG_c22725_g1_i1 122bp
3115	O_BomaMSG12804_complete:A_BomaMSG_c22726_g1_i1 613bp		signal_recognition_particle_receptor_alpha_subunit_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003723 F RNA binding GO:0003924 F GTPase activity GO:0005047 F signal recognition particle binding GO:0005525 F GTP binding GO:0005783 C endoplasmic reticulum GO:0005785 C signal recognition particle receptor complex GO:0005789 C endoplasmic reticulum membrane GO:0005811 C lipid droplet GO:0006614 P SRP-dependent cotranslational protein targeting to membrane GO:0006810 P transport GO:0006886 P intracellular protein transport GO:0007409 P axonogenesis GO:0008152 P metabolic process GO:0012505 C endomembrane system GO:0016020 C membrane GO:0019233 P sensory perception of pain GO:0050708 P regulation of protein secretion
3116	O_BomaMSG12805_3prime_partial:A_BomaMSG_c22727_g1_i1 238bp		protein_psiQ_[Bombyx_mori]	GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0010466 P negative regulation of peptidase activity GO:0010951 P negative regulation of endopeptidase activity GO:0030414 F peptidase inhibitor activity
3117	O_BomaMSG12806_5prime_partial:A_BomaMSG_c22727_g1_i1 137bp
3118	O_BomaMSG12807_3prime_partial:A_BomaMSG_c22727_g1_i2 289bp
3119	O_BomaMSG12808_5prime_partial:A_BomaMSG_c22727_g1_i2 263bp		prolow-density_lipoprotein_receptor-related_protein_1-like_[Bombyx_mori]	GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0010466 P negative regulation of peptidase activity GO:0010951 P negative regulation of endopeptidase activity GO:0030414 F peptidase inhibitor activity
3120	O_BomaMSG12809_complete:A_BomaMSG_c22727_g1_i2 102bp