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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3031 O_BomaMSG12729_5prime_partial:A_BomaMSG_c22687_g1_i1
130bp
3032 O_BomaMSG1272_5prime_partial:A_BomaMSG_c5229_g1_i1
101bp
3033 O_BomaMSG12730_5prime_partial:A_BomaMSG_c22687_g1_i1
104bp
PREDICTED:_uncharacterized_protein_LOC106718363_[Papilio_machaon]
3034 O_BomaMSG12731_internal:A_BomaMSG_c22688_g1_i1
258bp
HSPB1-associated_protein_1_[Bombyx_mori]
GO:0005737 C cytoplasm
3035 O_BomaMSG12732_complete:A_BomaMSG_c22688_g1_i2
407bp
HSPB1-associated_protein_1_[Bombyx_mori]
GO:0005737 C cytoplasm
3036 O_BomaMSG12733_3prime_partial:A_BomaMSG_c22689_g1_i2
395bp
gastrula_zinc_finger_protein_XlCGF57.1-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0033674 P positive regulation of kinase activity
GO:0043066 P negative regulation of apoptotic process
GO:0045648 P positive regulation of erythrocyte differentiation
GO:0045654 P positive regulation of megakaryocyte differentiation
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051781 P positive regulation of cell division
GO:0072707 P cellular response to sodium dodecyl sulfate
GO:1901989 P positive regulation of cell cycle phase transition
3037 O_BomaMSG12734_5prime_partial:A_BomaMSG_c22691_g1_i1
167bp
mitochondrial_Rho_GTPase-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005509 F calcium ion binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0007005 P mitochondrion organization
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019725 P cellular homeostasis
GO:0031307 C integral component of mitochondrial outer membrane
GO:0046872 F metal ion binding
GO:0047497 P mitochondrion transport along microtubule
GO:0097345 P mitochondrial outer membrane permeabilization
3038 O_BomaMSG12735_5prime_partial:A_BomaMSG_c22691_g1_i2
456bp
mitochondrial_Rho_GTPase-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000226 P microtubule cytoskeleton organization
GO:0000287 F magnesium ion binding
GO:0003924 F GTPase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005829 C cytosol
GO:0007005 P mitochondrion organization
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007268 P chemical synaptic transmission
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019725 P cellular homeostasis
GO:0031122 P cytoplasmic microtubule organization
GO:0031307 C integral component of mitochondrial outer membrane
GO:0034643 P establishment of mitochondrion localization, microtubule-mediated
GO:0046872 F metal ion binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048489 P synaptic vesicle transport
GO:0051646 P mitochondrion localization
GO:0097345 P mitochondrial outer membrane permeabilization
3039 O_BomaMSG12736_5prime_partial:A_BomaMSG_c22691_g1_i3
208bp
mitochondrial_Rho_GTPase-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000226 P microtubule cytoskeleton organization
GO:0000287 F magnesium ion binding
GO:0003924 F GTPase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005829 C cytosol
GO:0007005 P mitochondrion organization
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007268 P chemical synaptic transmission
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019725 P cellular homeostasis
GO:0031122 P cytoplasmic microtubule organization
GO:0031307 C integral component of mitochondrial outer membrane
GO:0034643 P establishment of mitochondrion localization, microtubule-mediated
GO:0046872 F metal ion binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048489 P synaptic vesicle transport
GO:0051646 P mitochondrion localization
GO:0097345 P mitochondrial outer membrane permeabilization
3040 O_BomaMSG12737_5prime_partial:A_BomaMSG_c22691_g1_i4
142bp
mitochondrial_Rho_GTPase-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005509 F calcium ion binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0007005 P mitochondrion organization
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019725 P cellular homeostasis
GO:0031307 C integral component of mitochondrial outer membrane
GO:0046872 F metal ion binding
GO:0047497 P mitochondrion transport along microtubule
GO:0097345 P mitochondrial outer membrane permeabilization
3041 O_BomaMSG12738_internal:A_BomaMSG_c22692_g1_i1
660bp
E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
3042 O_BomaMSG12739_complete:A_BomaMSG_c22692_g1_i1
216bp
3043 O_BomaMSG1273_5prime_partial:A_BomaMSG_c5232_g1_i1
128bp
pyridine_nucleotide-disulfide_oxidoreductase_domain-containing_protein_1_[Bombyx_mori]
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
3044 O_BomaMSG12740_internal:A_BomaMSG_c22692_g1_i2
180bp
E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
3045 O_BomaMSG12741_3prime_partial:A_BomaMSG_c22692_g1_i3
799bp
E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
3046 O_BomaMSG12742_complete:A_BomaMSG_c22692_g1_i3
216bp
3047 O_BomaMSG12743_complete:A_BomaMSG_c22692_g1_i4
116bp
E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
3048 O_BomaMSG12744_3prime_partial:A_BomaMSG_c22692_g1_i5
774bp
E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
3049 O_BomaMSG12745_complete:A_BomaMSG_c22692_g1_i5
216bp
3050 O_BomaMSG12746_5prime_partial:A_BomaMSG_c22694_g1_i2
258bp
putative_RNA_exonuclease_NEF-sp_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3051 O_BomaMSG12747_5prime_partial:A_BomaMSG_c22695_g1_i1
324bp
protein_spinster_isoform_X3_[Bombyx_mori]
GO:0003376 P sphingosine-1-phosphate receptor signaling pathway
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0007040 P lysosome organization
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007619 P courtship behavior
GO:0008333 P endosome to lysosome transport
GO:0008347 P glial cell migration
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0009267 P cellular response to starvation
GO:0010001 P glial cell differentiation
GO:0012501 P programmed cell death
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0035193 P larval central nervous system remodeling
GO:0040011 P locomotion
GO:0043067 P regulation of programmed cell death
GO:0045476 P nurse cell apoptotic process
GO:0045477 P regulation of nurse cell apoptotic process
GO:0045924 P regulation of female receptivity
GO:0046624 F sphingolipid transporter activity
GO:0048477 P oogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0055085 P transmembrane transport
GO:0090099 P negative regulation of BMP signaling pathway
3052 O_BomaMSG12748_5prime_partial:A_BomaMSG_c22695_g1_i1
103bp
3053 O_BomaMSG12749_complete:A_BomaMSG_c22695_g1_i2
305bp
protein_spinster_isoform_X1_[Bombyx_mori]
GO:0003376 P sphingosine-1-phosphate receptor signaling pathway
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0007040 P lysosome organization
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007619 P courtship behavior
GO:0008333 P endosome to lysosome transport
GO:0008347 P glial cell migration
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0009267 P cellular response to starvation
GO:0010001 P glial cell differentiation
GO:0012501 P programmed cell death
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0035193 P larval central nervous system remodeling
GO:0040011 P locomotion
GO:0043067 P regulation of programmed cell death
GO:0045476 P nurse cell apoptotic process
GO:0045477 P regulation of nurse cell apoptotic process
GO:0045924 P regulation of female receptivity
GO:0046624 F sphingolipid transporter activity
GO:0048477 P oogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0055085 P transmembrane transport
GO:0090099 P negative regulation of BMP signaling pathway
3054 O_BomaMSG1274_internal:A_BomaMSG_c5233_g1_i1
124bp
uncharacterized_protein_LOC101741121_isoform_X2_[Bombyx_mori]
3055 O_BomaMSG12750_5prime_partial:A_BomaMSG_c22695_g1_i2
103bp
3056 O_BomaMSG12751_5prime_partial:A_BomaMSG_c22695_g1_i3
298bp
protein_spinster_isoform_X1_[Bombyx_mori]
GO:0003376 P sphingosine-1-phosphate receptor signaling pathway
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0007040 P lysosome organization
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007619 P courtship behavior
GO:0008333 P endosome to lysosome transport
GO:0008347 P glial cell migration
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0009267 P cellular response to starvation
GO:0010001 P glial cell differentiation
GO:0012501 P programmed cell death
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0035193 P larval central nervous system remodeling
GO:0040011 P locomotion
GO:0043067 P regulation of programmed cell death
GO:0045476 P nurse cell apoptotic process
GO:0045477 P regulation of nurse cell apoptotic process
GO:0045924 P regulation of female receptivity
GO:0046624 F sphingolipid transporter activity
GO:0048477 P oogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0055085 P transmembrane transport
GO:0090099 P negative regulation of BMP signaling pathway
3057 O_BomaMSG12752_5prime_partial:A_BomaMSG_c22695_g1_i3
103bp
3058 O_BomaMSG12753_5prime_partial:A_BomaMSG_c22695_g1_i4
113bp
protein_spinster_isoform_X4_[Bombyx_mori]
GO:0003376 P sphingosine-1-phosphate receptor signaling pathway
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0007040 P lysosome organization
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007619 P courtship behavior
GO:0008333 P endosome to lysosome transport
GO:0008347 P glial cell migration
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0009267 P cellular response to starvation
GO:0010001 P glial cell differentiation
GO:0012501 P programmed cell death
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0035193 P larval central nervous system remodeling
GO:0040011 P locomotion
GO:0043067 P regulation of programmed cell death
GO:0045476 P nurse cell apoptotic process
GO:0045477 P regulation of nurse cell apoptotic process
GO:0045924 P regulation of female receptivity
GO:0046624 F sphingolipid transporter activity
GO:0048477 P oogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0055085 P transmembrane transport
GO:0090099 P negative regulation of BMP signaling pathway
3059 O_BomaMSG12754_5prime_partial:A_BomaMSG_c22695_g1_i4
103bp
3060 O_BomaMSG12755_complete:A_BomaMSG_c22696_g1_i1
197bp
uncharacterized_protein_LOC101739219_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005761 C mitochondrial ribosome
GO:0005840 C ribosome
GO:0008150 P biological_process
GO:0030529 C ribonucleoprotein complex
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