Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2461	O_BomaMSG12215_complete:A_BomaMSG_c22453_g1_i1 247bp		UPF0454_protein_C12orf49_homolog_[Bombyx_mori]	GO:0005576 C extracellular region
2462	O_BomaMSG12216_internal:A_BomaMSG_c22454_g1_i1 297bp		putative_mediator_of_RNA_polymerase_II_transcription_subunit_26_isoform_X1_[Bombyx_mori]
2463	O_BomaMSG12217_complete:A_BomaMSG_c22454_g1_i1 102bp
2464	O_BomaMSG12218_complete:A_BomaMSG_c22455_g1_i1 142bp
2465	O_BomaMSG12219_internal:A_BomaMSG_c22456_g1_i1 280bp		pre-mRNA_3'_end_processing_protein_WDR33_isoform_X1_[Bombyx_mori]	GO:0005581 C collagen trimer GO:0005634 C nucleus GO:0005730 C nucleolus GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex GO:0006378 P mRNA polyadenylation GO:0006379 P mRNA cleavage GO:0006397 P mRNA processing GO:0044822 F RNA binding
2466	O_BomaMSG1221_5prime_partial:A_BomaMSG_c5072_g1_i1 101bp		heterogeneous_nuclear_ribonucleoprotein_H_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000398 P mRNA splicing, via spliceosome GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005681 C spliceosomal complex GO:0006396 P RNA processing GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0030529 C ribonucleoprotein complex GO:0030855 P epithelial cell differentiation GO:0044822 F RNA binding
2467	O_BomaMSG12220_internal:A_BomaMSG_c22456_g1_i2 242bp		pre-mRNA_3'_end_processing_protein_WDR33_isoform_X1_[Bombyx_mori]
2468	O_BomaMSG12221_internal:A_BomaMSG_c22456_g1_i3 143bp		pre-mRNA_3'_end_processing_protein_WDR33_isoform_X1_[Bombyx_mori]
2469	O_BomaMSG12222_internal:A_BomaMSG_c22456_g1_i4 216bp		pre-mRNA_3'_end_processing_protein_WDR33_isoform_X1_[Bombyx_mori]
2470	O_BomaMSG12223_complete:A_BomaMSG_c22459_g1_i1 125bp		histone_H2A-like_protein_2_[Bombyx_mori]	GO:0000786 C nucleosome GO:0003677 F DNA binding GO:0005634 C nucleus GO:0005694 C chromosome GO:0046982 F protein heterodimerization activity
2471	O_BomaMSG12224_5prime_partial:A_BomaMSG_c22459_g1_i1 118bp
2472	O_BomaMSG12225_internal:A_BomaMSG_c22460_g1_i1 247bp		inactive_pancreatic_lipase-related_protein_1_[Bombyx_mori]	GO:0004806 F triglyceride lipase activity GO:0005509 F calcium ion binding GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0006629 P lipid metabolic process GO:0016298 F lipase activity GO:0046872 F metal ion binding GO:0052689 F carboxylic ester hydrolase activity
2473	O_BomaMSG12226_complete:A_BomaMSG_c22461_g1_i2 484bp		phosphatidylcholine:ceramide_cholinephosphotransferase_2-like_isoform_X1_[Bombyx_mori]	GO:0000138 C Golgi trans cisterna GO:0000139 C Golgi membrane GO:0005634 C nucleus GO:0005783 C endoplasmic reticulum GO:0005794 C Golgi apparatus GO:0005886 C plasma membrane GO:0006629 P lipid metabolic process GO:0006665 P sphingolipid metabolic process GO:0006686 P sphingomyelin biosynthetic process GO:0006915 P apoptotic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016049 P cell growth GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0030148 P sphingolipid biosynthetic process GO:0030173 C integral component of Golgi membrane GO:0033188 F sphingomyelin synthase activity GO:0047493 F ceramide cholinephosphotransferase activity
2474	O_BomaMSG12227_complete:A_BomaMSG_c22461_g1_i2 226bp
2475	O_BomaMSG12228_complete:A_BomaMSG_c22461_g1_i2 113bp
2476	O_BomaMSG12229_complete:A_BomaMSG_c22461_g1_i3 444bp		phosphatidylcholine:ceramide_cholinephosphotransferase_2-like_isoform_X1_[Bombyx_mori]	GO:0000138 C Golgi trans cisterna GO:0000139 C Golgi membrane GO:0005634 C nucleus GO:0005783 C endoplasmic reticulum GO:0005794 C Golgi apparatus GO:0005886 C plasma membrane GO:0006629 P lipid metabolic process GO:0006665 P sphingolipid metabolic process GO:0006686 P sphingomyelin biosynthetic process GO:0006915 P apoptotic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016049 P cell growth GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0030148 P sphingolipid biosynthetic process GO:0030173 C integral component of Golgi membrane GO:0033188 F sphingomyelin synthase activity GO:0047493 F ceramide cholinephosphotransferase activity
2477	O_BomaMSG1222_3prime_partial:A_BomaMSG_c5074_g1_i1 146bp		uncharacterized_protein_LOC101736829_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0005739 C mitochondrion GO:0008150 P biological_process GO:0043280 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic process GO:0090200 P positive regulation of release of cytochrome c from mitochondria GO:0097193 P intrinsic apoptotic signaling pathway
2478	O_BomaMSG12230_complete:A_BomaMSG_c22461_g1_i3 226bp
2479	O_BomaMSG12231_complete:A_BomaMSG_c22461_g1_i3 113bp
2480	O_BomaMSG12232_5prime_partial:A_BomaMSG_c22462_g1_i1 327bp		PWWP_domain-containing_protein_2A_isoform_X1_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
2481	O_BomaMSG12233_3prime_partial:A_BomaMSG_c22462_g1_i1 154bp
2482	O_BomaMSG12234_5prime_partial:A_BomaMSG_c22464_g1_i1 297bp		innexin_2_[Bombyx_mori]	GO:0005243 F gap junction channel activity GO:0005886 C plasma membrane GO:0005921 C gap junction GO:0006810 P transport GO:0006811 P ion transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030054 C cell junction GO:0055085 P transmembrane transport
2483	O_BomaMSG12235_5prime_partial:A_BomaMSG_c22464_g1_i1 128bp
2484	O_BomaMSG12236_5prime_partial:A_BomaMSG_c22464_g1_i2 379bp		innexin_2_[Bombyx_mori]	GO:0005243 F gap junction channel activity GO:0005886 C plasma membrane GO:0005921 C gap junction GO:0006810 P transport GO:0006811 P ion transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030054 C cell junction GO:0055085 P transmembrane transport
2485	O_BomaMSG12237_complete:A_BomaMSG_c22464_g1_i2 135bp
2486	O_BomaMSG12238_internal:A_BomaMSG_c22465_g1_i1 169bp		ribosome-recycling_factor,_mitochondrial_[Bombyx_mori]	GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0006412 P translation GO:0032790 P ribosome disassembly GO:0043023 F ribosomal large subunit binding GO:0070126 P mitochondrial translational termination
2487	O_BomaMSG12239_internal:A_BomaMSG_c22465_g1_i2 194bp		ribosome-recycling_factor,_mitochondrial_[Bombyx_mori]	GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0006412 P translation GO:0032790 P ribosome disassembly GO:0043023 F ribosomal large subunit binding GO:0070126 P mitochondrial translational termination
2488	O_BomaMSG1223_3prime_partial:A_BomaMSG_c5075_g1_i1 107bp		uncharacterized_protein_LOC101740438_isoform_X1_[Bombyx_mori]
2489	O_BomaMSG12240_5prime_partial:A_BomaMSG_c22465_g1_i3 283bp		ribosome-recycling_factor,_mitochondrial_[Bombyx_mori]	GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0006412 P translation GO:0032790 P ribosome disassembly GO:0043023 F ribosomal large subunit binding GO:0070126 P mitochondrial translational termination
2490	O_BomaMSG12241_internal:A_BomaMSG_c22466_g1_i1 172bp		THO_complex_subunit_2_isoform_X2_[Bombyx_mori]	GO:0003723 F RNA binding GO:0005634 C nucleus GO:0006397 P mRNA processing GO:0006810 P transport GO:0008380 P RNA splicing GO:0016607 C nuclear speck GO:0048666 P neuron development GO:0048699 P generation of neurons GO:0051028 P mRNA transport