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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1951 O_BomaMSG11757_complete:A_BomaMSG_c22195_g1_i3
172bp
putative_gamma-glutamylcyclotransferase_CG2811_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
1952 O_BomaMSG11758_complete:A_BomaMSG_c22195_g1_i4
161bp
putative_gamma-glutamylcyclotransferase_CG2811_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
1953 O_BomaMSG11759_internal:A_BomaMSG_c22196_g1_i1
316bp
1954 O_BomaMSG1175_internal:A_BomaMSG_c4887_g1_i1
109bp
1-phosphatidylinositol_3-phosphate_5-kinase_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0000285 F 1-phosphatidylinositol-3-phosphate 5-kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005911 C cell-cell junction
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0012506 C vesicle membrane
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016307 F phosphatidylinositol phosphate kinase activity
GO:0016308 F 1-phosphatidylinositol-4-phosphate 5-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0032288 P myelin assembly
GO:0032593 C insulin-responsive compartment
GO:0034504 P protein localization to nucleus
GO:0035556 P intracellular signal transduction
GO:0042147 P retrograde transport, endosome to Golgi
GO:0045121 C membrane raft
GO:0046488 P phosphatidylinositol metabolic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0052810 F 1-phosphatidylinositol-5-kinase activity
GO:2000785 P regulation of autophagosome assembly
1955 O_BomaMSG11760_5prime_partial:A_BomaMSG_c22196_g1_i1
303bp
WD_and_tetratricopeptide_repeats_protein_1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001701 P in utero embryonic development
GO:0004857 F enzyme inhibitor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006006 P glucose metabolic process
GO:0008361 P regulation of cell size
GO:0016567 P protein ubiquitination
GO:0032869 P cellular response to insulin stimulus
GO:0035264 P multicellular organism growth
GO:0042393 F histone binding
GO:0042826 F histone deacetylase binding
GO:0043086 P negative regulation of catalytic activity
GO:0045717 P negative regulation of fatty acid biosynthetic process
GO:0055082 P cellular chemical homeostasis
1956 O_BomaMSG11761_3prime_partial:A_BomaMSG_c22196_g1_i1
171bp
1957 O_BomaMSG11762_complete:A_BomaMSG_c22196_g1_i1
122bp
1958 O_BomaMSG11763_5prime_partial:A_BomaMSG_c22196_g1_i2
309bp
1959 O_BomaMSG11764_5prime_partial:A_BomaMSG_c22196_g1_i2
303bp
WD_and_tetratricopeptide_repeats_protein_1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001701 P in utero embryonic development
GO:0004857 F enzyme inhibitor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006006 P glucose metabolic process
GO:0008361 P regulation of cell size
GO:0016567 P protein ubiquitination
GO:0032869 P cellular response to insulin stimulus
GO:0035264 P multicellular organism growth
GO:0042393 F histone binding
GO:0042826 F histone deacetylase binding
GO:0043086 P negative regulation of catalytic activity
GO:0045717 P negative regulation of fatty acid biosynthetic process
GO:0055082 P cellular chemical homeostasis
1960 O_BomaMSG11765_3prime_partial:A_BomaMSG_c22196_g1_i2
171bp
1961 O_BomaMSG11766_complete:A_BomaMSG_c22196_g1_i2
122bp
1962 O_BomaMSG11767_5prime_partial:A_BomaMSG_c22196_g1_i3
268bp
1963 O_BomaMSG11768_5prime_partial:A_BomaMSG_c22196_g1_i3
264bp
1964 O_BomaMSG11769_5prime_partial:A_BomaMSG_c22196_g1_i3
259bp
WD_and_tetratricopeptide_repeats_protein_1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001701 P in utero embryonic development
GO:0004857 F enzyme inhibitor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006006 P glucose metabolic process
GO:0008361 P regulation of cell size
GO:0016567 P protein ubiquitination
GO:0032869 P cellular response to insulin stimulus
GO:0035264 P multicellular organism growth
GO:0042393 F histone binding
GO:0042826 F histone deacetylase binding
GO:0043086 P negative regulation of catalytic activity
GO:0045717 P negative regulation of fatty acid biosynthetic process
GO:0055082 P cellular chemical homeostasis
1965 O_BomaMSG1176_internal:A_BomaMSG_c4895_g1_i1
111bp
fatty_acid_synthase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004312 F fatty acid synthase activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0016874 F ligase activity
GO:0055114 P obsolete oxidation-reduction process
1966 O_BomaMSG11770_3prime_partial:A_BomaMSG_c22196_g1_i3
127bp
1967 O_BomaMSG11771_complete:A_BomaMSG_c22196_g1_i3
122bp
1968 O_BomaMSG11772_3prime_partial:A_BomaMSG_c22199_g1_i1
171bp
G_protein_alpha_subunit_Go_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0004871 F obsolete signal transducer activity
GO:0005525 F GTP binding
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007188 P adenylate cyclase-modulating G protein-coupled receptor signaling pathway
GO:0008152 P metabolic process
GO:0019001 F guanyl nucleotide binding
GO:0031683 F G-protein beta/gamma-subunit complex binding
GO:0046872 F metal ion binding
1969 O_BomaMSG11773_internal:A_BomaMSG_c22200_g1_i1
329bp
uncharacterized_protein_LOC101742622_[Bombyx_mori]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004564 F beta-fructofuranosidase activity
GO:0004575 F sucrose alpha-glucosidase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0005985 P sucrose metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
1970 O_BomaMSG11774_5prime_partial:A_BomaMSG_c22200_g1_i1
111bp
1971 O_BomaMSG11775_3prime_partial:A_BomaMSG_c22200_g2_i1
108bp
uncharacterized_protein_LOC101742622_[Bombyx_mori]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004575 F sucrose alpha-glucosidase activity
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0005987 P sucrose catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0051669 F fructan beta-fructosidase activity
1972 O_BomaMSG11776_3prime_partial:A_BomaMSG_c22201_g1_i1
198bp
U1_small_nuclear_ribonucleoprotein_70_kDa_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000243 C commitment complex
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005685 C U1 snRNP
GO:0006397 P mRNA processing
GO:0007052 P mitotic spindle organization
GO:0016607 C nuclear speck
GO:0022008 P neurogenesis
GO:0030529 C ribonucleoprotein complex
GO:0030619 F U1 snRNA binding
GO:0043484 P regulation of RNA splicing
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0071004 C U2-type prespliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
1973 O_BomaMSG11777_complete:A_BomaMSG_c22201_g1_i2
158bp
U1_small_nuclear_ribonucleoprotein_70_kDa_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000243 C commitment complex
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005685 C U1 snRNP
GO:0006397 P mRNA processing
GO:0007052 P mitotic spindle organization
GO:0016607 C nuclear speck
GO:0022008 P neurogenesis
GO:0030529 C ribonucleoprotein complex
GO:0030619 F U1 snRNA binding
GO:0043484 P regulation of RNA splicing
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0071004 C U2-type prespliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
1974 O_BomaMSG11778_complete:A_BomaMSG_c22201_g1_i3
158bp
U1_small_nuclear_ribonucleoprotein_70_kDa_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000243 C commitment complex
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005685 C U1 snRNP
GO:0006397 P mRNA processing
GO:0007052 P mitotic spindle organization
GO:0016607 C nuclear speck
GO:0022008 P neurogenesis
GO:0030529 C ribonucleoprotein complex
GO:0030619 F U1 snRNA binding
GO:0043484 P regulation of RNA splicing
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0071004 C U2-type prespliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
1975 O_BomaMSG11779_5prime_partial:A_BomaMSG_c22201_g1_i3
135bp
1976 O_BomaMSG1177_internal:A_BomaMSG_c4899_g1_i1
196bp
aprataxin-like_protein_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0033699 F DNA 5'-adenosine monophosphate hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1977 O_BomaMSG11780_5prime_partial:A_BomaMSG_c22201_g2_i2
108bp
1978 O_BomaMSG11781_internal:A_BomaMSG_c22204_g1_i1
480bp
AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
1979 O_BomaMSG11782_complete:A_BomaMSG_c22204_g1_i1
354bp
1980 O_BomaMSG11783_internal:A_BomaMSG_c22205_g1_i1
161bp
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