SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/24827
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1861 O_BomaMSG11676_5prime_partial:A_BomaMSG_c22153_g1_i1
148bp
contactin_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0007155 P cell adhesion
GO:0008366 P axon ensheathment
GO:0016020 C membrane
GO:0019991 P septate junction assembly
GO:0021682 P nerve maturation
GO:0030054 C cell junction
GO:0031225 C anchored component of membrane
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0060857 P establishment of glial blood-brain barrier
GO:0061343 P cell adhesion involved in heart morphogenesis
1862 O_BomaMSG11677_complete:A_BomaMSG_c22153_g1_i1
106bp
1863 O_BomaMSG11678_internal:A_BomaMSG_c22154_g1_i1
278bp
LOW_QUALITY_PROTEIN:_probable_protein_phosphatase_2C_20_[Bombyx_mori]
1864 O_BomaMSG11679_3prime_partial:A_BomaMSG_c22154_g1_i1
121bp
1865 O_BomaMSG1167_internal:A_BomaMSG_c4872_g1_i1
106bp
dynein_regulatory_complex_subunit_7_isoform_X4_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0031514 C motile cilium
GO:0042995 C cell projection
1866 O_BomaMSG11680_internal:A_BomaMSG_c22156_g1_i1
294bp
kettin_protein_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005863 C striated muscle myosin thick filament
GO:0005875 C microtubule associated complex
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0007522 P visceral muscle development
GO:0007525 P somatic muscle development
GO:0008307 F structural constituent of muscle
GO:0016203 P muscle attachment
GO:0019233 P sensory perception of pain
GO:0030017 C sarcomere
GO:0030018 C Z disc
GO:0031674 C I band
GO:0035206 P regulation of hemocyte proliferation
GO:0040011 P locomotion
GO:0045214 P sarcomere organization
GO:0051301 P cell division
1867 O_BomaMSG11681_internal:A_BomaMSG_c22156_g1_i2
104bp
kettin_protein_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005863 C striated muscle myosin thick filament
GO:0005875 C microtubule associated complex
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0007522 P visceral muscle development
GO:0007525 P somatic muscle development
GO:0008307 F structural constituent of muscle
GO:0016203 P muscle attachment
GO:0019233 P sensory perception of pain
GO:0030017 C sarcomere
GO:0030018 C Z disc
GO:0031674 C I band
GO:0035206 P regulation of hemocyte proliferation
GO:0040011 P locomotion
GO:0045214 P sarcomere organization
GO:0051301 P cell division
1868 O_BomaMSG11682_5prime_partial:A_BomaMSG_c22158_g1_i1
116bp
1869 O_BomaMSG11683_5prime_partial:A_BomaMSG_c22158_g1_i2
136bp
1870 O_BomaMSG11684_3prime_partial:A_BomaMSG_c22158_g1_i2
102bp
1871 O_BomaMSG11685_5prime_partial:A_BomaMSG_c22158_g1_i3
106bp
1872 O_BomaMSG11686_complete:A_BomaMSG_c22160_g1_i2
207bp
uncharacterized_protein_LOC101738606_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0008171 F O-methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
1873 O_BomaMSG11687_internal:A_BomaMSG_c22161_g1_i1
158bp
putative_ribosome-binding_factor_A,_mitochondrial_isoform_X2_[Bombyx_mori]
1874 O_BomaMSG11688_3prime_partial:A_BomaMSG_c22161_g2_i1
222bp
putative_ribosome-binding_factor_A,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0006364 P rRNA processing
1875 O_BomaMSG11689_5prime_partial:A_BomaMSG_c22162_g1_i1
181bp
serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
1876 O_BomaMSG1168_3prime_partial:A_BomaMSG_c4873_g1_i1
105bp
trafficking_protein_particle_complex_subunit_4_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005801 C cis-Golgi network
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0016358 P dendrite development
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030008 C TRAPP complex
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0045212 P obsolete neurotransmitter receptor biosynthetic process
1877 O_BomaMSG11690_complete:A_BomaMSG_c22162_g1_i1
159bp
1878 O_BomaMSG11691_complete:A_BomaMSG_c22162_g1_i1
132bp
1879 O_BomaMSG11692_5prime_partial:A_BomaMSG_c22162_g1_i2
150bp
1880 O_BomaMSG11693_3prime_partial:A_BomaMSG_c22163_g1_i1
297bp
vacuolar_protein_sorting_26_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005768 C endosome
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
1881 O_BomaMSG11694_internal:A_BomaMSG_c22164_g1_i1
101bp
coiled-coil_domain-containing_protein_130_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
1882 O_BomaMSG11695_internal:A_BomaMSG_c22164_g1_i2
383bp
coiled-coil_domain-containing_protein_130_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
1883 O_BomaMSG11696_complete:A_BomaMSG_c22165_g1_i1
636bp
sodium/hydrogen_exchanger_9B2_isoform_X4_[Bombyx_mori]
GO:0005451 F monovalent cation:proton antiporter activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006814 P sodium ion transport
GO:0015297 F antiporter activity
GO:0015299 F solute:proton antiporter activity
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0034220 P ion transmembrane transport
GO:0055085 P transmembrane transport
GO:1902600 P proton transmembrane transport
GO:2001206 P positive regulation of osteoclast development
1884 O_BomaMSG11697_complete:A_BomaMSG_c22165_g1_i1
164bp
1885 O_BomaMSG11698_complete:A_BomaMSG_c22165_g1_i1
137bp
1886 O_BomaMSG11699_complete:A_BomaMSG_c22165_g1_i1
119bp
1887 O_BomaMSG1169_internal:A_BomaMSG_c4874_g1_i1
114bp
pleckstrin_homology_domain-containing_family_G_member_5_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005902 C microvillus
GO:0008150 P biological_process
GO:0032154 C cleavage furrow
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
1888 O_BomaMSG116_5prime_partial:A_BomaMSG_c570_g1_i1
110bp
1889 O_BomaMSG11700_complete:A_BomaMSG_c22165_g1_i1
100bp
1890 O_BomaMSG11701_5prime_partial:A_BomaMSG_c22165_g1_i2
714bp
sodium/hydrogen_exchanger_9B2_isoform_X1_[Bombyx_mori]
GO:0005451 F monovalent cation:proton antiporter activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006814 P sodium ion transport
GO:0015297 F antiporter activity
GO:0015299 F solute:proton antiporter activity
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0034220 P ion transmembrane transport
GO:0055085 P transmembrane transport
GO:1902600 P proton transmembrane transport
GO:2001206 P positive regulation of osteoclast development
previous next from show/24827

- SilkBase 1999-2023 -