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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1351 O_BomaMSG11216_5prime_partial:A_BomaMSG_c21897_g2_i2
186bp
1352 O_BomaMSG11217_complete:A_BomaMSG_c21898_g1_i1
170bp
neuferricin_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0008150 P biological_process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0020037 F heme binding
1353 O_BomaMSG11218_5prime_partial:A_BomaMSG_c21898_g1_i4
236bp
neuferricin_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0008150 P biological_process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0020037 F heme binding
1354 O_BomaMSG11219_internal:A_BomaMSG_c21900_g1_i1
213bp
Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94,_partial_[Stegodyphus_mimosarum]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1355 O_BomaMSG1121_complete:A_BomaMSG_c4758_g1_i1
107bp
1356 O_BomaMSG11220_5prime_partial:A_BomaMSG_c21901_g1_i1
123bp
1357 O_BomaMSG11221_complete:A_BomaMSG_c21901_g1_i3
207bp
PEST_proteolytic_signal-containing_nuclear_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
1358 O_BomaMSG11222_5prime_partial:A_BomaMSG_c21901_g1_i4
151bp
PEST_proteolytic_signal-containing_nuclear_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
1359 O_BomaMSG11223_internal:A_BomaMSG_c21902_g1_i1
111bp
Gag-pol_polyprotein,_partial_[Operophtera_brumata]
1360 O_BomaMSG11224_internal:A_BomaMSG_c21902_g1_i2
229bp
PREDICTED:_uncharacterized_protein_LOC106111652_[Papilio_polytes]
1361 O_BomaMSG11225_internal:A_BomaMSG_c21903_g1_i1
383bp
Nogo-B_receptor_[Trachymyrmex_septentrionalis]
1362 O_BomaMSG11226_internal:A_BomaMSG_c21903_g1_i1
383bp
brahma-associated_protein_of_60_kDa,_partial_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005719 C euchromatin
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0010628 P positive regulation of gene expression
GO:0017022 F myosin binding
GO:0031453 P positive regulation of heterochromatin assembly
GO:0035060 C brahma complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070604 C RSC-type complex
1363 O_BomaMSG11227_internal:A_BomaMSG_c21903_g1_i2
388bp
Nogo-B_receptor_[Trachymyrmex_septentrionalis]
1364 O_BomaMSG11228_internal:A_BomaMSG_c21903_g1_i2
388bp
brahma-associated_protein_of_60_kDa,_partial_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005719 C euchromatin
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0010628 P positive regulation of gene expression
GO:0017022 F myosin binding
GO:0031453 P positive regulation of heterochromatin assembly
GO:0035060 C brahma complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070604 C RSC-type complex
1365 O_BomaMSG11229_3prime_partial:A_BomaMSG_c21905_g1_i1
152bp
phosphohistidine_phosphatase_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007548 P sex differentiation
GO:0030154 P cell differentiation
1366 O_BomaMSG1122_complete:A_BomaMSG_c4759_g1_i1
266bp
NADH_dehydrogenase_[ubiquinone]_iron-sulfur_protein_3,_mitochondrial_[Bombyx_mori]
GO:0003954 F NADH dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0030308 P negative regulation of cell growth
GO:0031966 C mitochondrial membrane
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
GO:0072593 P reactive oxygen species metabolic process
GO:2001243 P negative regulation of intrinsic apoptotic signaling pathway
1367 O_BomaMSG11230_5prime_partial:A_BomaMSG_c21906_g1_i1
316bp
ubiquitin_carboxyl-terminal_hydrolase_nonstop_[Bombyx_mori]
GO:0000124 C SAGA complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0008347 P glial cell migration
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021782 P glial cell development
GO:0036459 F thiol-dependent deubiquitinase
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071819 C DUBm complex
1368 O_BomaMSG11231_internal:A_BomaMSG_c21909_g1_i1
153bp
uncharacterized_protein_LOC101735968_isoform_X3_[Bombyx_mori]
1369 O_BomaMSG11232_internal:A_BomaMSG_c21909_g1_i1
153bp
1370 O_BomaMSG11233_internal:A_BomaMSG_c21909_g1_i2
372bp
uncharacterized_protein_LOC101735968_isoform_X3_[Bombyx_mori]
1371 O_BomaMSG11234_5prime_partial:A_BomaMSG_c21909_g1_i2
176bp
1372 O_BomaMSG11235_complete:A_BomaMSG_c21910_g1_i1
118bp
1373 O_BomaMSG11236_5prime_partial:A_BomaMSG_c21911_g1_i1
304bp
uncharacterized_protein_LOC101740831_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006915 P apoptotic process
GO:0008150 P biological_process
1374 O_BomaMSG11237_complete:A_BomaMSG_c21912_g1_i1
326bp
solute_carrier_family_35_member_B3_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030173 C integral component of Golgi membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0046963 P 3'-phosphoadenosine 5'-phosphosulfate transport
GO:0046964 F 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:1902559 P 3'-phospho-5'-adenylyl sulfate transmembrane transport
1375 O_BomaMSG11238_3prime_partial:A_BomaMSG_c21914_g1_i1
137bp
PREDICTED:_craniofacial_development_protein_2-like_[Amyelois_transitella]
1376 O_BomaMSG11239_5prime_partial:A_BomaMSG_c21914_g1_i2
231bp
PREDICTED:_uncharacterized_protein_LOC106720787_[Papilio_machaon]
1377 O_BomaMSG1123_internal:A_BomaMSG_c4762_g1_i1
135bp
suppressor_protein_SRP40-like_[Bombyx_mori]
1378 O_BomaMSG11240_3prime_partial:A_BomaMSG_c21914_g1_i2
137bp
PREDICTED:_craniofacial_development_protein_2-like_[Amyelois_transitella]
1379 O_BomaMSG11241_3prime_partial:A_BomaMSG_c21914_g1_i3
137bp
PREDICTED:_craniofacial_development_protein_2-like_[Amyelois_transitella]
1380 O_BomaMSG11242_5prime_partial:A_BomaMSG_c21914_g1_i3
105bp
PREDICTED:_uncharacterized_protein_LOC106127160_[Papilio_xuthus]
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