SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/206471
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
871 A_BomoIG_DN11435_c0_g1_i1
643bp
 Pol_protein_[Bombyx_mori]
FPKM:0.28 TPM:0.15
872 A_BomoIG_DN11436_c0_g1_i1
253bp
FPKM:1.16 TPM:0.64
873 A_BomoIG_DN11437_c0_g1_i1
335bp
FPKM:0.53 TPM:0.30
874 A_BomoIG_DN11447_c0_g1_i1
394bp
FPKM:1.13 TPM:0.63
875 A_BomoIG_DN11449_c0_g1_i1
232bp
FPKM:0.00 TPM:0.00
876 A_BomoIG_DN11453_c0_g1_i1
297bp
FPKM:0.27 TPM:0.15
877 A_BomoIG_DN11457_c0_g1_i1
354bp
FPKM:0.19 TPM:0.11
878 A_BomoIG_DN11457_c0_g2_i1
667bp
FPKM:1.47 TPM:0.82
879 A_BomoIG_DN11458_c0_g1_i1
230bp
FPKM:0.00 TPM:0.00
880 A_BomoIG_DN11463_c0_g1_i1
272bp
FPKM:0.16 TPM:0.09
881 A_BomoIG_DN11466_c0_g1_i1
214bp
FPKM:0.00 TPM:0.00
882 A_BomoIG_DN11468_c0_g1_i1
551bp
FPKM:0.24 TPM:0.14
883 A_BomoIG_DN11472_c0_g1_i1
256bp
FPKM:0.00 TPM:0.00
884 A_BomoIG_DN11472_c1_g1_i1
250bp
FPKM:0.79 TPM:0.44
885 A_BomoIG_DN11475_c0_g1_i1
907bp
 alpha-mannosidase_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001701 P in utero embryonic development
GO:0001889 P liver development
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004559 F alpha-mannosidase activity
GO:0004572 F mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity
GO:0005615 C extracellular space
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0005975 P carbohydrate metabolic process
GO:0006013 P mannose metabolic process
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0006517 P protein deglycosylation
GO:0007005 P mitochondrion organization
GO:0007033 P vacuole organization
GO:0007585 P respiratory gaseous exchange by respiratory system
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0015923 F mannosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016799 F hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
GO:0048286 P lung alveolus development
GO:0050769 P positive regulation of neurogenesis
GO:0060042 P retina morphogenesis in camera-type eye
GO:0070062 C extracellular exosome
FPKM:0.39 TPM:0.21
886 A_BomoIG_DN11476_c0_g1_i1
299bp
FPKM:0.80 TPM:0.44
887 A_BomoIG_DN1147_c0_g1_i1
383bp
FPKM:0.42 TPM:0.23
888 A_BomoIG_DN11480_c0_g1_i1
205bp
FPKM:0.00 TPM:0.00
889 A_BomoIG_DN11481_c0_g1_i1
236bp
FPKM:0.00 TPM:0.00
890 A_BomoIG_DN11484_c0_g1_i1
239bp
FPKM:0.00 TPM:0.00
891 A_BomoIG_DN11487_c0_g1_i1
228bp
FPKM:0.00 TPM:0.00
892 A_BomoIG_DN11488_c0_g1_i1
214bp
FPKM:1.88 TPM:1.04
893 A_BomoIG_DN11489_c0_g1_i1
220bp
FPKM:1.41 TPM:0.78
894 A_BomoIG_DN11490_c0_g1_i1
243bp
FPKM:0.00 TPM:0.00
895 A_BomoIG_DN11491_c0_g1_i1
600bp
FPKM:0.09 TPM:0.05
896 A_BomoIG_DN11491_c0_g2_i1
388bp
FPKM:0.00 TPM:0.00
897 A_BomoIG_DN11492_c0_g1_i1
328bp
FPKM:0.11 TPM:0.06
898 A_BomoIG_DN11495_c0_g1_i1
598bp
FPKM:0.13 TPM:0.07
899 A_BomoIG_DN11496_c0_g1_i1
272bp
FPKM:0.33 TPM:0.18
900 A_BomoIG_DN11498_c0_g1_i1
339bp
FPKM:0.73 TPM:0.41
previous next from show/206471

- SilkBase 1999-2023 -