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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
721 A_BomoIG_DN11212_c0_g1_i1
392bp
 uncharacterized_protein_LOC110386833_[Bombyx_mori]
FPKM:0.00 TPM:0.00
722 A_BomoIG_DN11212_c0_g1_i2
338bp
 uncharacterized_protein_LOC110386833_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0001222 F transcription corepressor binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016580 C Sin3 complex
GO:0017053 C transcription repressor complex
GO:0035091 F phosphatidylinositol binding
GO:0042393 F histone binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.62 TPM:1.46
723 A_BomoIG_DN11214_c0_g1_i1
583bp
FPKM:0.23 TPM:0.13
724 A_BomoIG_DN11215_c0_g1_i1
251bp
FPKM:0.00 TPM:0.00
725 A_BomoIG_DN11215_c0_g2_i1
251bp
FPKM:0.00 TPM:0.00
726 A_BomoIG_DN11217_c0_g1_i1
314bp
FPKM:3.37 TPM:1.88
727 A_BomoIG_DN1121_c0_g1_i1
575bp
FPKM:0.23 TPM:0.13
728 A_BomoIG_DN11220_c0_g1_i1
435bp
FPKM:0.48 TPM:0.27
729 A_BomoIG_DN11221_c0_g1_i1
220bp
FPKM:0.84 TPM:0.47
730 A_BomoIG_DN11223_c0_g1_i1
522bp
FPKM:0.95 TPM:0.53
731 A_BomoIG_DN11225_c0_g1_i1
512bp
FPKM:0.00 TPM:0.00
732 A_BomoIG_DN11225_c0_g2_i1
283bp
FPKM:0.00 TPM:0.00
733 A_BomoIG_DN11229_c0_g1_i1
230bp
FPKM:0.25 TPM:0.14
734 A_BomoIG_DN1122_c0_g1_i1
406bp
FPKM:0.00 TPM:0.00
735 A_BomoIG_DN11233_c0_g1_i1
260bp
FPKM:0.00 TPM:0.00
736 A_BomoIG_DN11237_c0_g1_i1
658bp
FPKM:0.61 TPM:0.34
737 A_BomoIG_DN1123_c0_g1_i1
253bp
 retina_and_anterior_neural_fold_homeobox_protein_2_isoform_X1_[Bombyx_mori]
FPKM:0.00 TPM:0.00
738 A_BomoIG_DN1123_c0_g1_i2
378bp
 retina_and_anterior_neural_fold_homeobox_protein_2_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008150 P biological_process
GO:0030154 P cell differentiation
GO:0043565 F sequence-specific DNA binding
FPKM:0.00 TPM:0.00
739 A_BomoIG_DN11244_c0_g1_i1
233bp
FPKM:0.00 TPM:0.00
740 A_BomoIG_DN11244_c0_g2_i1
333bp
FPKM:0.00 TPM:0.00
741 A_BomoIG_DN11245_c0_g1_i1
407bp
FPKM:1.13 TPM:0.63
742 A_BomoIG_DN11246_c0_g1_i1
335bp
FPKM:0.11 TPM:0.06
743 A_BomoIG_DN11246_c0_g1_i2
260bp
FPKM:0.54 TPM:0.30
744 A_BomoIG_DN11249_c0_g1_i1
369bp
FPKM:1.26 TPM:0.70
745 A_BomoIG_DN11251_c0_g1_i1
1046bp
FPKM:3.59 TPM:2.00
746 A_BomoIG_DN11253_c0_g1_i1
204bp
FPKM:0.71 TPM:0.40
747 A_BomoIG_DN11255_c0_g1_i1
462bp
FPKM:0.24 TPM:0.13
748 A_BomoIG_DN11255_c0_g1_i2
590bp
FPKM:1.25 TPM:0.70
749 A_BomoIG_DN11256_c0_g1_i1
399bp
FPKM:0.24 TPM:0.13
750 A_BomoIG_DN11257_c0_g1_i1
276bp
FPKM:0.47 TPM:0.26
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