SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/206471
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
7201 A_BomoIG_DN2286_c0_g1_i1
607bp
FPKM:4.74 TPM:2.64
7202 A_BomoIG_DN22871_c0_g1_i1
401bp
 reverse_transcriptase,_partial_[Bombyx_mori]
FPKM:1.10 TPM:0.61
7203 A_BomoIG_DN22873_c0_g1_i1
205bp
FPKM:0.70 TPM:0.39
7204 A_BomoIG_DN22874_c0_g1_i1
509bp
FPKM:0.05 TPM:0.03
7205 A_BomoIG_DN22875_c0_g1_i1
291bp
FPKM:0.28 TPM:0.16
7206 A_BomoIG_DN22876_c0_g1_i1
237bp
FPKM:0.00 TPM:0.00
7207 A_BomoIG_DN22879_c0_g1_i1
275bp
FPKM:0.32 TPM:0.18
7208 A_BomoIG_DN22882_c0_g1_i1
763bp
FPKM:0.83 TPM:0.46
7209 A_BomoIG_DN22883_c0_g1_i1
603bp
 uncharacterized_protein_LOC101741659_[Bombyx_mori]
GO:0003941 F L-serine ammonia-lyase activity
GO:0004794 F L-threonine ammonia-lyase activity
GO:0005737 C cytoplasm
GO:0006520 P cellular amino acid metabolic process
GO:0006565 P L-serine catabolic process
GO:0006567 P threonine catabolic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009082 P branched-chain amino acid biosynthetic process
GO:0009097 P isoleucine biosynthetic process
GO:0016597 F amino acid binding
GO:0016829 F lyase activity
GO:0030170 F pyridoxal phosphate binding
FPKM:0.35 TPM:0.20
7210 A_BomoIG_DN22883_c0_g1_i2
996bp
 uncharacterized_protein_LOC101741659_[Bombyx_mori]
GO:0003941 F L-serine ammonia-lyase activity
GO:0004794 F L-threonine ammonia-lyase activity
GO:0005737 C cytoplasm
GO:0006520 P cellular amino acid metabolic process
GO:0006565 P L-serine catabolic process
GO:0006567 P threonine catabolic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009082 P branched-chain amino acid biosynthetic process
GO:0009097 P isoleucine biosynthetic process
GO:0016597 F amino acid binding
GO:0016829 F lyase activity
GO:0030170 F pyridoxal phosphate binding
FPKM:0.85 TPM:0.47
7211 A_BomoIG_DN22885_c0_g1_i1
293bp
 RNA-dependent_RNA_polymerase_[Hubei_chuvirus-like_virus_3]
FPKM:0.42 TPM:0.23
7212 A_BomoIG_DN22888_c0_g1_i1
425bp
FPKM:0.86 TPM:0.48
7213 A_BomoIG_DN2288_c0_g1_i1
415bp
FPKM:0.22 TPM:0.12
7214 A_BomoIG_DN22891_c0_g1_i1
220bp
FPKM:0.00 TPM:0.00
7215 A_BomoIG_DN22893_c0_g1_i1
244bp
FPKM:0.00 TPM:0.00
7216 A_BomoIG_DN22897_c0_g1_i1
333bp
FPKM:0.11 TPM:0.06
7217 A_BomoIG_DN2289_c0_g1_i1
997bp
 probable_serine/threonine-protein_kinase_nek3_isoform_X2_[Bombyx_mori]
FPKM:0.16 TPM:0.09
7218 A_BomoIG_DN2289_c0_g2_i1
278bp
FPKM:0.77 TPM:0.43
7219 A_BomoIG_DN22900_c0_g1_i1
247bp
FPKM:0.00 TPM:0.00
7220 A_BomoIG_DN22903_c0_g1_i1
211bp
FPKM:0.00 TPM:0.00
7221 A_BomoIG_DN22908_c0_g1_i1
361bp
FPKM:0.09 TPM:0.05
7222 A_BomoIG_DN22911_c0_g1_i1
342bp
FPKM:0.51 TPM:0.29
7223 A_BomoIG_DN22913_c0_g1_i1
252bp
FPKM:0.00 TPM:0.00
7224 A_BomoIG_DN22913_c0_g2_i1
278bp
FPKM:0.00 TPM:0.00
7225 A_BomoIG_DN2291_c0_g1_i1
227bp
FPKM:0.26 TPM:0.14
7226 A_BomoIG_DN22922_c0_g1_i1
466bp
FPKM:1.49 TPM:0.83
7227 A_BomoIG_DN22923_c0_g1_i1
312bp
FPKM:0.00 TPM:0.00
7228 A_BomoIG_DN22925_c0_g1_i1
243bp
FPKM:1.07 TPM:0.59
7229 A_BomoIG_DN22926_c0_g1_i1
223bp
FPKM:0.27 TPM:0.15
7230 A_BomoIG_DN22927_c0_g1_i1
205bp
FPKM:0.35 TPM:0.20
previous next from show/206471

- SilkBase 1999-2023 -