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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6841 A_BomoIG_DN2224_c0_g1_i1
229bp
FPKM:0.25 TPM:0.14
6842 A_BomoIG_DN22259_c0_g1_i1
321bp
FPKM:0.23 TPM:0.13
6843 A_BomoIG_DN22260_c0_g1_i1
228bp
FPKM:0.00 TPM:0.00
6844 A_BomoIG_DN22262_c0_g1_i1
307bp
FPKM:1.26 TPM:0.70
6845 A_BomoIG_DN22263_c0_g1_i1
204bp
FPKM:0.36 TPM:0.20
6846 A_BomoIG_DN22264_c0_g1_i1
645bp
 sodium-dependent_noradrenaline_transporter-like_isoform_X2_[Bombyx_mori]
GO:0005328 F neurotransmitter:sodium symporter activity
GO:0005329 F dopamine:sodium symporter activity
GO:0005330 F dopamine:sodium symporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0015293 F symporter activity
GO:0015872 P dopamine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019811 F cocaine binding
GO:0030431 P sleep
GO:0042745 P circadian sleep/wake cycle
GO:0043005 C neuron projection
GO:0046872 F metal ion binding
GO:0051583 P dopamine uptake involved in synaptic transmission
GO:0055085 P transmembrane transport
GO:0072488 P ammonium transmembrane transport
GO:0098793 C presynapse
GO:0099509 P regulation of presynaptic cytosolic calcium ion concentration
GO:1990834 P response to odorant
FPKM:0.00 TPM:0.00
6847 A_BomoIG_DN22265_c0_g1_i1
644bp
FPKM:0.43 TPM:0.24
6848 A_BomoIG_DN22268_c0_g1_i1
448bp
FPKM:0.07 TPM:0.04
6849 A_BomoIG_DN22269_c0_g1_i1
489bp
FPKM:1.96 TPM:1.09
6850 A_BomoIG_DN22270_c0_g1_i1
243bp
FPKM:2.14 TPM:1.19
6851 A_BomoIG_DN22276_c0_g1_i1
1183bp
FPKM:0.00 TPM:0.00
6852 A_BomoIG_DN22277_c0_g1_i1
251bp
FPKM:0.39 TPM:0.22
6853 A_BomoIG_DN22277_c0_g2_i1
311bp
FPKM:0.86 TPM:0.48
6854 A_BomoIG_DN22278_c0_g1_i1
306bp
FPKM:0.13 TPM:0.07
6855 A_BomoIG_DN22279_c0_g1_i1
208bp
FPKM:0.00 TPM:0.00
6856 A_BomoIG_DN2227_c0_g1_i1
335bp
FPKM:0.00 TPM:0.00
6857 A_BomoIG_DN22280_c0_g1_i1
270bp
FPKM:0.66 TPM:0.37
6858 A_BomoIG_DN22282_c0_g1_i1
301bp
FPKM:0.13 TPM:0.07
6859 A_BomoIG_DN22285_c0_g1_i1
274bp
FPKM:1.28 TPM:0.71
6860 A_BomoIG_DN22287_c0_g1_i1
2787bp
 voltage-dependent_calcium_channel_subunit_alpha-2/delta-3_[Bombyx_mori]
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005246 F calcium channel regulator activity
GO:0005262 F calcium channel activity
GO:0005886 C plasma membrane
GO:0005891 C voltage-gated calcium channel complex
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0046872 F metal ion binding
GO:0050908 P detection of light stimulus involved in visual perception
GO:0051924 P regulation of calcium ion transport
GO:0061337 P cardiac conduction
GO:0070588 P calcium ion transmembrane transport
FPKM:0.00 TPM:0.00
6861 A_BomoIG_DN22288_c0_g1_i1
416bp
FPKM:0.15 TPM:0.08
6862 A_BomoIG_DN2228_c0_g1_i1
357bp
 malate_dehydrogenase,_mitochondrial_isoform_X2_[Bombyx_mori]
FPKM:0.00 TPM:0.00
6863 A_BomoIG_DN22290_c0_g1_i1
354bp
 zinc_finger_protein_93-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
FPKM:2.03 TPM:1.13
6864 A_BomoIG_DN22294_c0_g1_i1
283bp
FPKM:0.75 TPM:0.41
6865 A_BomoIG_DN22296_c0_g1_i1
248bp
FPKM:0.00 TPM:0.00
6866 A_BomoIG_DN22298_c0_g1_i1
217bp
FPKM:0.00 TPM:0.00
6867 A_BomoIG_DN22299_c0_g1_i1
551bp
FPKM:0.44 TPM:0.24
6868 A_BomoIG_DN2229_c0_g1_i1
236bp
FPKM:0.00 TPM:0.00
6869 A_BomoIG_DN22302_c0_g1_i1
205bp
FPKM:0.00 TPM:0.00
6870 A_BomoIG_DN22304_c0_g1_i1
248bp
FPKM:0.41 TPM:0.23
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