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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6121 A_BomoIG_DN21118_c0_g1_i1
323bp
FPKM:0.91 TPM:0.51
6122 A_BomoIG_DN21119_c0_g1_i1
202bp
 uncharacterized_protein_LOC101736466_[Bombyx_mori]
FPKM:0.00 TPM:0.00
6123 A_BomoIG_DN21120_c0_g1_i1
392bp
FPKM:0.73 TPM:0.41
6124 A_BomoIG_DN21121_c0_g1_i1
206bp
FPKM:0.00 TPM:0.00
6125 A_BomoIG_DN21124_c0_g1_i1
226bp
FPKM:0.00 TPM:0.00
6126 A_BomoIG_DN21125_c0_g1_i1
221bp
FPKM:0.28 TPM:0.15
6127 A_BomoIG_DN2112_c0_g1_i1
258bp
FPKM:3.13 TPM:1.74
6128 A_BomoIG_DN21130_c0_g1_i1
349bp
FPKM:0.10 TPM:0.06
6129 A_BomoIG_DN21131_c0_g1_i1
438bp
 RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Danaus_plexippus_plexippus]
FPKM:0.07 TPM:0.04
6130 A_BomoIG_DN21132_c0_g1_i1
260bp
FPKM:0.18 TPM:0.10
6131 A_BomoIG_DN21135_c0_g1_i1
207bp
FPKM:0.00 TPM:0.00
6132 A_BomoIG_DN21136_c0_g1_i1
249bp
FPKM:0.80 TPM:0.45
6133 A_BomoIG_DN2113_c0_g1_i1
349bp
FPKM:0.53 TPM:0.29
6134 A_BomoIG_DN2113_c0_g1_i2
268bp
FPKM:1.96 TPM:1.09
6135 A_BomoIG_DN21144_c0_g1_i1
748bp
FPKM:3.10 TPM:1.73
6136 A_BomoIG_DN21145_c0_g1_i1
414bp
 transposase,_partial_[Antheraea_yamamai]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.67 TPM:0.37
6137 A_BomoIG_DN21146_c0_g1_i1
332bp
FPKM:0.00 TPM:0.00
6138 A_BomoIG_DN21147_c0_g1_i1
300bp
 talin-B_[Bombyx_mori]
FPKM:0.79 TPM:0.44
6139 A_BomoIG_DN21148_c0_g1_i1
419bp
FPKM:0.22 TPM:0.12
6140 A_BomoIG_DN21148_c0_g1_i2
330bp
FPKM:0.22 TPM:0.12
6141 A_BomoIG_DN2114_c0_g1_i1
301bp
FPKM:0.00 TPM:0.00
6142 A_BomoIG_DN21150_c0_g1_i1
293bp
FPKM:0.42 TPM:0.23
6143 A_BomoIG_DN21151_c0_g1_i1
300bp
FPKM:0.13 TPM:0.07
6144 A_BomoIG_DN21152_c0_g1_i1
269bp
FPKM:0.00 TPM:0.00
6145 A_BomoIG_DN21157_c0_g1_i1
1180bp
 unknown_secreted_protein_[Papilio_xuthus]
FPKM:48.79 TPM:27.17
6146 A_BomoIG_DN21159_c0_g1_i1
322bp
FPKM:0.00 TPM:0.00
6147 A_BomoIG_DN21160_c0_g1_i1
449bp
FPKM:0.66 TPM:0.37
6148 A_BomoIG_DN21162_c0_g1_i1
452bp
FPKM:4.55 TPM:2.53
6149 A_BomoIG_DN21162_c0_g1_i2
396bp
FPKM:1.99 TPM:1.11
6150 A_BomoIG_DN21163_c0_g1_i1
229bp
FPKM:1.25 TPM:0.70
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