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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4921 A_BomoIG_DN18891_c0_g1_i1
221bp
FPKM:0.28 TPM:0.15
4922 A_BomoIG_DN18892_c0_g1_i1
395bp
FPKM:0.48 TPM:0.27
4923 A_BomoIG_DN18896_c0_g1_i1
648bp
 protein_dachsous_[Bombyx_mori]
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001736 P establishment of planar polarity
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0004871 F obsolete signal transducer activity
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007164 P establishment of tissue polarity
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016318 P ommatidial rotation
GO:0016337 P cell-cell adhesion
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0018149 P peptide cross-linking
GO:0030010 P establishment of cell polarity
GO:0035159 P regulation of tube length, open tracheal system
GO:0035222 P wing disc pattern formation
GO:0042067 P establishment of ommatidial planar polarity
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045296 F cadherin binding
GO:0045317 P equator specification
GO:0048592 P eye morphogenesis
GO:0050839 F cell adhesion molecule binding
GO:0090175 P regulation of establishment of planar polarity
GO:0090176 P microtubule cytoskeleton organization involved in establishment of planar polarity
FPKM:0.35 TPM:0.20
4924 A_BomoIG_DN18897_c0_g1_i1
674bp
 uncharacterized_protein_LOC101740049_[Bombyx_mori]
FPKM:1.57 TPM:0.87
4925 A_BomoIG_DN18899_c0_g1_i1
459bp
FPKM:0.00 TPM:0.00
4926 A_BomoIG_DN1889_c0_g1_i1
388bp
FPKM:0.74 TPM:0.41
4927 A_BomoIG_DN18901_c0_g1_i1
342bp
FPKM:2.26 TPM:1.26
4928 A_BomoIG_DN18906_c0_g1_i1
290bp
FPKM:1.13 TPM:0.63
4929 A_BomoIG_DN1890_c0_g1_i1
297bp
FPKM:0.67 TPM:0.37
4930 A_BomoIG_DN18912_c0_g1_i1
361bp
FPKM:0.28 TPM:0.16
4931 A_BomoIG_DN18914_c0_g1_i1
203bp
FPKM:0.00 TPM:0.00
4932 A_BomoIG_DN18914_c0_g2_i1
312bp
FPKM:0.00 TPM:0.00
4933 A_BomoIG_DN18917_c0_g1_i1
361bp
FPKM:0.47 TPM:0.26
4934 A_BomoIG_DN18919_c0_g1_i1
802bp
 PAXIP1-associated_glutamate-rich_protein_1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0030331 F estrogen receptor binding
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0035097 C histone methyltransferase complex
GO:0044666 C MLL3/4 complex
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048304 P positive regulation of isotype switching to IgG isotypes
GO:0060717 P chorion development
GO:0071557 P histone H3-K27 demethylation
GO:1902749 P regulation of cell cycle G2/M phase transition
GO:1902808 P positive regulation of cell cycle G1/S phase transition
GO:2001022 P positive regulation of response to DNA damage stimulus
FPKM:1.17 TPM:0.65
4935 A_BomoIG_DN1891_c0_g1_i1
450bp
FPKM:0.00 TPM:0.00
4936 A_BomoIG_DN18925_c0_g1_i1
277bp
FPKM:0.00 TPM:0.00
4937 A_BomoIG_DN18926_c0_g1_i1
223bp
FPKM:1.62 TPM:0.90
4938 A_BomoIG_DN18929_c0_g1_i1
237bp
 regulator_of_hypoxia-inducible_factor_1_isoform_X2_[Bombyx_mori]
FPKM:0.46 TPM:0.25
4939 A_BomoIG_DN1892_c0_g1_i1
463bp
 cuticular_protein_RR-1_motif_26_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
FPKM:83.08 TPM:46.26
4940 A_BomoIG_DN18931_c0_g1_i1
354bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X4_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.00 TPM:0.00
4941 A_BomoIG_DN18933_c0_g1_i1
227bp
FPKM:0.26 TPM:0.14
4942 A_BomoIG_DN18934_c0_g1_i1
273bp
FPKM:1.94 TPM:1.08
4943 A_BomoIG_DN18937_c0_g1_i1
211bp
FPKM:0.32 TPM:0.18
4944 A_BomoIG_DN18943_c0_g1_i1
258bp
FPKM:0.00 TPM:0.00
4945 A_BomoIG_DN18946_c0_g1_i1
215bp
FPKM:0.60 TPM:0.34
4946 A_BomoIG_DN18949_c0_g1_i1
741bp
FPKM:0.86 TPM:0.48
4947 A_BomoIG_DN1894_c0_g1_i1
295bp
FPKM:0.96 TPM:0.53
4948 A_BomoIG_DN1894_c0_g2_i1
343bp
FPKM:1.23 TPM:0.68
4949 A_BomoIG_DN18950_c0_g1_i1
264bp
FPKM:0.52 TPM:0.29
4950 A_BomoIG_DN18951_c0_g1_i1
296bp
 transposase,_partial_[Cadra_cautella]
FPKM:0.41 TPM:0.23
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