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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4801 A_BomoIG_DN18662_c0_g1_i1
436bp
FPKM:0.00 TPM:0.00
4802 A_BomoIG_DN18663_c0_g1_i1
1005bp
FPKM:0.20 TPM:0.11
4803 A_BomoIG_DN18667_c0_g1_i1
230bp
FPKM:0.00 TPM:0.00
4804 A_BomoIG_DN18669_c0_g1_i1
285bp
FPKM:0.88 TPM:0.49
4805 A_BomoIG_DN1866_c0_g1_i1
274bp
FPKM:0.48 TPM:0.27
4806 A_BomoIG_DN18670_c0_g1_i1
262bp
FPKM:0.18 TPM:0.10
4807 A_BomoIG_DN18673_c0_g1_i1
2061bp
 sodium-coupled_monocarboxylate_transporter_1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006915 P apoptotic process
GO:0008028 F monocarboxylic acid transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015718 P monocarboxylic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0022803 F passive transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
FPKM:7.06 TPM:3.93
4808 A_BomoIG_DN18676_c0_g1_i1
254bp
FPKM:0.00 TPM:0.00
4809 A_BomoIG_DN1867_c0_g1_i1
1061bp
 rRNA_processing_protein_Ebp2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0034399 C nuclear periphery
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
FPKM:3.26 TPM:1.81
4810 A_BomoIG_DN1867_c0_g1_i2
653bp
 rRNA_processing_protein_Ebp2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0034399 C nuclear periphery
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
FPKM:2.59 TPM:1.44
4811 A_BomoIG_DN18680_c0_g1_i1
623bp
FPKM:0.70 TPM:0.39
4812 A_BomoIG_DN18684_c0_g1_i1
552bp
FPKM:3.26 TPM:1.81
4813 A_BomoIG_DN18686_c0_g1_i1
319bp
FPKM:0.00 TPM:0.00
4814 A_BomoIG_DN18687_c0_g1_i1
602bp
FPKM:2.42 TPM:1.35
4815 A_BomoIG_DN18690_c0_g1_i1
272bp
FPKM:1.30 TPM:0.72
4816 A_BomoIG_DN18690_c0_g2_i1
245bp
FPKM:1.05 TPM:0.58
4817 A_BomoIG_DN18692_c0_g1_i1
302bp
FPKM:0.00 TPM:0.00
4818 A_BomoIG_DN18696_c0_g1_i1
455bp
FPKM:0.00 TPM:0.00
4819 A_BomoIG_DN18697_c0_g1_i1
260bp
FPKM:0.00 TPM:0.00
4820 A_BomoIG_DN18698_c0_g1_i1
268bp
FPKM:0.00 TPM:0.00
4821 A_BomoIG_DN18699_c0_g1_i1
435bp
FPKM:0.00 TPM:0.00
4822 A_BomoIG_DN18701_c0_g1_i1
400bp
FPKM:0.55 TPM:0.31
4823 A_BomoIG_DN18702_c0_g1_i1
246bp
 unknown_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4824 A_BomoIG_DN18702_c0_g1_i2
266bp
 unknown_[Bombyx_mori]
FPKM:2.23 TPM:1.24
4825 A_BomoIG_DN18703_c0_g1_i1
424bp
FPKM:0.79 TPM:0.44
4826 A_BomoIG_DN18706_c0_g1_i1
2449bp
 uncharacterized_protein_LOC101747067_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0044822 F RNA binding
FPKM:1.03 TPM:0.57
4827 A_BomoIG_DN18708_c0_g1_i1
214bp
FPKM:0.31 TPM:0.17
4828 A_BomoIG_DN18709_c0_g1_i1
434bp
FPKM:0.35 TPM:0.19
4829 A_BomoIG_DN18711_c0_g1_i1
267bp
FPKM:0.17 TPM:0.09
4830 A_BomoIG_DN18714_c0_g1_i1
237bp
FPKM:0.00 TPM:0.00
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