SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/206471
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4621 A_BomoIG_DN18326_c0_g1_i1
277bp
FPKM:0.00 TPM:0.00
4622 A_BomoIG_DN18327_c0_g1_i1
231bp
FPKM:0.49 TPM:0.27
4623 A_BomoIG_DN1832_c0_g1_i1
290bp
FPKM:0.42 TPM:0.24
4624 A_BomoIG_DN18332_c0_g1_i1
376bp
 decaprenyl-diphosphate_synthase_subunit_2_[Bombyx_mori]
GO:0008299 P isoprenoid biosynthetic process
GO:0009536 C plastid
GO:0009842 C cyanelle
GO:0015979 P photosynthesis
GO:0016740 F transferase activity
GO:0016765 F transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0046872 F metal ion binding
FPKM:0.61 TPM:0.34
4625 A_BomoIG_DN18337_c0_g1_i1
750bp
 atlastin_[Bombyx_mori]
FPKM:4.42 TPM:2.46
4626 A_BomoIG_DN1833_c0_g1_i1
255bp
FPKM:0.19 TPM:0.11
4627 A_BomoIG_DN18342_c0_g1_i1
260bp
FPKM:0.36 TPM:0.20
4628 A_BomoIG_DN18342_c0_g2_i1
381bp
FPKM:0.34 TPM:0.19
4629 A_BomoIG_DN18346_c0_g1_i1
437bp
FPKM:0.00 TPM:0.00
4630 A_BomoIG_DN18351_c0_g1_i1
215bp
FPKM:0.30 TPM:0.17
4631 A_BomoIG_DN18352_c0_g1_i1
290bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.42 TPM:0.24
4632 A_BomoIG_DN18354_c0_g1_i1
347bp
FPKM:0.40 TPM:0.22
4633 A_BomoIG_DN18355_c0_g1_i1
269bp
 hypothetical_protein_RR48_00002_[Papilio_machaon]
FPKM:0.67 TPM:0.37
4634 A_BomoIG_DN18357_c0_g1_i1
221bp
FPKM:0.28 TPM:0.15
4635 A_BomoIG_DN18358_c0_g1_i1
442bp
FPKM:0.00 TPM:0.00
4636 A_BomoIG_DN18362_c0_g1_i1
478bp
FPKM:0.60 TPM:0.33
4637 A_BomoIG_DN18364_c0_g1_i1
346bp
FPKM:0.20 TPM:0.11
4638 A_BomoIG_DN18368_c0_g1_i1
788bp
FPKM:0.95 TPM:0.53
4639 A_BomoIG_DN18369_c0_g1_i1
697bp
FPKM:0.46 TPM:0.26
4640 A_BomoIG_DN1836_c0_g1_i1
426bp
FPKM:3.27 TPM:1.82
4641 A_BomoIG_DN18370_c0_g1_i1
318bp
FPKM:0.00 TPM:0.00
4642 A_BomoIG_DN18371_c0_g1_i1
600bp
 Uncharacterized_protein_OBRU01_02975_[Operophtera_brumata]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.26 TPM:0.15
4643 A_BomoIG_DN18374_c0_g1_i1
238bp
FPKM:0.00 TPM:0.00
4644 A_BomoIG_DN18377_c0_g1_i1
258bp
FPKM:0.00 TPM:0.00
4645 A_BomoIG_DN18377_c0_g2_i1
444bp
FPKM:0.07 TPM:0.04
4646 A_BomoIG_DN18381_c0_g1_i1
348bp
FPKM:0.30 TPM:0.17
4647 A_BomoIG_DN18383_c0_g1_i1
302bp
FPKM:2.86 TPM:1.59
4648 A_BomoIG_DN18385_c0_g1_i1
228bp
FPKM:0.00 TPM:0.00
4649 A_BomoIG_DN18387_c0_g1_i1
357bp
FPKM:0.19 TPM:0.11
4650 A_BomoIG_DN18389_c0_g1_i1
542bp
FPKM:3.80 TPM:2.12
previous next from show/206471

- SilkBase 1999-2023 -