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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4321 A_BomoIG_DN17737_c0_g1_i1
404bp
FPKM:2.63 TPM:1.46
4322 A_BomoIG_DN17738_c0_g1_i1
211bp
FPKM:0.00 TPM:0.00
4323 A_BomoIG_DN1773_c0_g1_i1
249bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4324 A_BomoIG_DN17741_c0_g1_i1
236bp
FPKM:0.00 TPM:0.00
4325 A_BomoIG_DN17750_c0_g1_i1
250bp
FPKM:0.60 TPM:0.33
4326 A_BomoIG_DN17754_c0_g1_i1
230bp
FPKM:0.74 TPM:0.41
4327 A_BomoIG_DN17755_c0_g1_i1
591bp
FPKM:0.00 TPM:0.00
4328 A_BomoIG_DN17758_c0_g1_i1
451bp
FPKM:1.17 TPM:0.65
4329 A_BomoIG_DN1775_c0_g1_i1
212bp
FPKM:0.63 TPM:0.35
4330 A_BomoIG_DN17761_c0_g1_i1
275bp
 uncharacterized_protein_LOC101740420_[Bombyx_mori]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.00 TPM:0.00
4331 A_BomoIG_DN17762_c0_g1_i1
336bp
FPKM:0.56 TPM:0.31
4332 A_BomoIG_DN17764_c0_g1_i1
429bp
FPKM:2.18 TPM:1.21
4333 A_BomoIG_DN17766_c0_g1_i1
322bp
FPKM:0.80 TPM:0.45
4334 A_BomoIG_DN17767_c0_g1_i1
339bp
FPKM:1.67 TPM:0.93
4335 A_BomoIG_DN17768_c0_g1_i1
266bp
FPKM:0.00 TPM:0.00
4336 A_BomoIG_DN17769_c0_g1_i1
203bp
FPKM:0.00 TPM:0.00
4337 A_BomoIG_DN17771_c0_g1_i1
203bp
FPKM:0.00 TPM:0.00
4338 A_BomoIG_DN17772_c0_g1_i1
279bp
FPKM:1.69 TPM:0.94
4339 A_BomoIG_DN17773_c0_g1_i1
361bp
FPKM:0.37 TPM:0.21
4340 A_BomoIG_DN17774_c0_g1_i1
398bp
FPKM:0.32 TPM:0.18
4341 A_BomoIG_DN1777_c0_g1_i1
238bp
FPKM:1.58 TPM:0.88
4342 A_BomoIG_DN17780_c0_g1_i1
427bp
FPKM:4.46 TPM:2.48
4343 A_BomoIG_DN17784_c0_g1_i1
535bp
 coiled-coil_domain-containing_protein_63_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0036157 C outer dynein arm
GO:0036158 P outer dynein arm assembly
GO:0042995 C cell projection
GO:0060294 P cilium movement involved in cell motility
FPKM:0.15 TPM:0.08
4344 A_BomoIG_DN17787_c0_g1_i1
606bp
FPKM:0.43 TPM:0.24
4345 A_BomoIG_DN17789_c0_g1_i1
276bp
FPKM:0.00 TPM:0.00
4346 A_BomoIG_DN17793_c0_g1_i1
292bp
FPKM:2.23 TPM:1.24
4347 A_BomoIG_DN17794_c0_g1_i1
232bp
FPKM:1.69 TPM:0.94
4348 A_BomoIG_DN17794_c1_g1_i1
223bp
FPKM:0.00 TPM:0.00
4349 A_BomoIG_DN17795_c0_g1_i1
242bp
FPKM:0.00 TPM:0.00
4350 A_BomoIG_DN17801_c0_g1_i1
327bp
FPKM:0.33 TPM:0.19
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