SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/206471
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4051 A_BomoIG_DN17171_c0_g1_i1
246bp
FPKM:0.00 TPM:0.00
4052 A_BomoIG_DN17172_c0_g1_i1
215bp
FPKM:0.00 TPM:0.00
4053 A_BomoIG_DN17172_c0_g2_i1
230bp
FPKM:0.00 TPM:0.00
4054 A_BomoIG_DN17175_c0_g1_i1
467bp
 pickpocket_protein_28_[Bombyx_mori]
GO:0005272 F sodium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0009415 P response to water
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035002 P liquid clearance, open tracheal system
GO:0035725 P sodium ion transmembrane transport
GO:0042756 P drinking behavior
GO:0071462 P cellular response to water stimulus
FPKM:0.56 TPM:0.31
4055 A_BomoIG_DN17176_c0_g1_i1
459bp
FPKM:0.00 TPM:0.00
4056 A_BomoIG_DN17177_c0_g1_i1
321bp
FPKM:4.39 TPM:2.44
4057 A_BomoIG_DN17179_c0_g1_i1
228bp
FPKM:0.76 TPM:0.42
4058 A_BomoIG_DN1717_c0_g1_i1
1041bp
 uncharacterized_protein_K02A2.6_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
FPKM:0.63 TPM:0.35
4059 A_BomoIG_DN17181_c0_g1_i1
267bp
FPKM:0.00 TPM:0.00
4060 A_BomoIG_DN17183_c0_g1_i1
253bp
FPKM:0.96 TPM:0.54
4061 A_BomoIG_DN17187_c0_g1_i1
254bp
FPKM:0.57 TPM:0.32
4062 A_BomoIG_DN17190_c0_g1_i1
224bp
FPKM:1.33 TPM:0.74
4063 A_BomoIG_DN17191_c0_g1_i1
321bp
FPKM:0.81 TPM:0.45
4064 A_BomoIG_DN17193_c0_g1_i1
627bp
FPKM:1.72 TPM:0.96
4065 A_BomoIG_DN17194_c0_g1_i1
360bp
FPKM:0.94 TPM:0.52
4066 A_BomoIG_DN1719_c0_g1_i1
373bp
FPKM:0.18 TPM:0.10
4067 A_BomoIG_DN17200_c0_g1_i1
349bp
 putative_fatty_acyl-CoA_reductase_CG5065_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
FPKM:0.69 TPM:0.39
4068 A_BomoIG_DN17205_c0_g1_i1
362bp
FPKM:0.19 TPM:0.10
4069 A_BomoIG_DN17206_c0_g1_i1
249bp
FPKM:0.60 TPM:0.34
4070 A_BomoIG_DN17208_c0_g1_i1
407bp
FPKM:0.08 TPM:0.04
4071 A_BomoIG_DN1720_c0_g1_i1
247bp
FPKM:0.00 TPM:0.00
4072 A_BomoIG_DN17212_c0_g1_i1
276bp
FPKM:0.63 TPM:0.35
4073 A_BomoIG_DN17215_c0_g1_i1
399bp
FPKM:0.08 TPM:0.04
4074 A_BomoIG_DN17217_c0_g1_i1
489bp
FPKM:0.40 TPM:0.23
4075 A_BomoIG_DN1721_c0_g1_i1
208bp
FPKM:0.00 TPM:0.00
4076 A_BomoIG_DN17220_c0_g1_i1
365bp
FPKM:0.18 TPM:0.10
4077 A_BomoIG_DN17222_c0_g1_i1
204bp
FPKM:0.00 TPM:0.00
4078 A_BomoIG_DN17224_c0_g1_i1
490bp
FPKM:0.98 TPM:0.55
4079 A_BomoIG_DN17225_c0_g1_i1
295bp
FPKM:0.49 TPM:0.27
4080 A_BomoIG_DN17225_c0_g1_i2
361bp
FPKM:0.13 TPM:0.07
previous next from show/206471

- SilkBase 1999-2023 -