SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/206471
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3931 A_BomoIG_DN16951_c0_g1_i2
268bp
FPKM:0.17 TPM:0.09
3932 A_BomoIG_DN16955_c0_g1_i1
693bp
FPKM:0.90 TPM:0.50
3933 A_BomoIG_DN1695_c0_g1_i1
450bp
FPKM:0.98 TPM:0.55
3934 A_BomoIG_DN16960_c0_g1_i1
201bp
FPKM:0.00 TPM:0.00
3935 A_BomoIG_DN16960_c0_g2_i1
264bp
FPKM:0.00 TPM:0.00
3936 A_BomoIG_DN16962_c0_g1_i1
422bp
FPKM:0.07 TPM:0.04
3937 A_BomoIG_DN16965_c0_g1_i1
350bp
FPKM:0.39 TPM:0.22
3938 A_BomoIG_DN16967_c0_g1_i1
329bp
FPKM:1.10 TPM:0.61
3939 A_BomoIG_DN1696_c0_g1_i1
211bp
FPKM:0.32 TPM:0.18
3940 A_BomoIG_DN16970_c0_g1_i1
243bp
FPKM:0.21 TPM:0.12
3941 A_BomoIG_DN16971_c0_g1_i1
307bp
FPKM:0.00 TPM:0.00
3942 A_BomoIG_DN16972_c0_g1_i1
264bp
FPKM:1.22 TPM:0.68
3943 A_BomoIG_DN16977_c0_g1_i1
382bp
FPKM:0.51 TPM:0.28
3944 A_BomoIG_DN16978_c0_g1_i1
239bp
FPKM:0.00 TPM:0.00
3945 A_BomoIG_DN1697_c0_g1_i1
298bp
FPKM:0.27 TPM:0.15
3946 A_BomoIG_DN16981_c0_g1_i1
256bp
FPKM:0.00 TPM:0.00
3947 A_BomoIG_DN16983_c0_g1_i1
481bp
FPKM:0.18 TPM:0.10
3948 A_BomoIG_DN16985_c0_g1_i1
639bp
 ribosomal_protein_L7Ae_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
FPKM:1.16 TPM:0.64
3949 A_BomoIG_DN16988_c0_g1_i1
236bp
FPKM:0.00 TPM:0.00
3950 A_BomoIG_DN16989_c0_g1_i1
284bp
FPKM:0.30 TPM:0.16
3951 A_BomoIG_DN1698_c0_g1_i1
461bp
 epsin-1_[Bombyx_mori]
FPKM:34.60 TPM:19.26
3952 A_BomoIG_DN1698_c0_g1_i2
490bp
 epsin-1_[Bombyx_mori]
FPKM:0.46 TPM:0.25
3953 A_BomoIG_DN16994_c0_g1_i1
337bp
FPKM:1.37 TPM:0.76
3954 A_BomoIG_DN16996_c0_g1_i1
241bp
FPKM:0.65 TPM:0.36
3955 A_BomoIG_DN16998_c0_g1_i1
714bp
FPKM:0.00 TPM:0.00
3956 A_BomoIG_DN1699_c0_g1_i1
1146bp
FPKM:3.52 TPM:1.96
3957 A_BomoIG_DN17006_c0_g1_i1
291bp
FPKM:0.00 TPM:0.00
3958 A_BomoIG_DN17007_c0_g1_i1
362bp
 LOW_QUALITY_PROTEIN:_fat-like_cadherin-related_tumor_suppressor_homolog,_partial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007293 P germarium-derived egg chamber formation
GO:0007295 P growth of a germarium-derived egg chamber
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0030950 P establishment or maintenance of actin cytoskeleton polarity
GO:0042247 P establishment of planar polarity of follicular epithelium
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045089 P positive regulation of innate immune response
GO:0045571 P negative regulation of imaginal disc growth
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050839 F cell adhesion molecule binding
GO:0060429 P epithelium development
FPKM:1.76 TPM:0.98
3959 A_BomoIG_DN17007_c0_g1_i2
434bp
 LOW_QUALITY_PROTEIN:_fat-like_cadherin-related_tumor_suppressor_homolog,_partial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007293 P germarium-derived egg chamber formation
GO:0007295 P growth of a germarium-derived egg chamber
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0030950 P establishment or maintenance of actin cytoskeleton polarity
GO:0042247 P establishment of planar polarity of follicular epithelium
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045089 P positive regulation of innate immune response
GO:0045571 P negative regulation of imaginal disc growth
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050839 F cell adhesion molecule binding
GO:0060429 P epithelium development
FPKM:0.35 TPM:0.19
3960 A_BomoIG_DN17009_c0_g1_i1
294bp
FPKM:0.27 TPM:0.15
previous next from show/206471

- SilkBase 1999-2023 -