SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/206471
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3751 A_BomoIG_DN16640_c0_g1_i1
444bp
FPKM:0.07 TPM:0.04
3752 A_BomoIG_DN16642_c0_g1_i1
433bp
FPKM:0.00 TPM:0.00
3753 A_BomoIG_DN16642_c0_g1_i2
505bp
FPKM:2.21 TPM:1.23
3754 A_BomoIG_DN16643_c0_g1_i1
389bp
 mast_cell_protease_3_isoform_X2_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3755 A_BomoIG_DN16648_c0_g1_i1
220bp
 laccase-10_[Bombyx_mori]
GO:0005507 F copper ion binding
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016722 F oxidoreductase activity, acting on metal ions
GO:0046274 P lignin catabolic process
GO:0046872 F metal ion binding
GO:0048046 C apoplast
GO:0052716 F hydroquinone:oxygen oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.00 TPM:0.00
3756 A_BomoIG_DN16648_c0_g1_i2
277bp
 laccase-10_[Bombyx_mori]
GO:0005507 F copper ion binding
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016722 F oxidoreductase activity, acting on metal ions
GO:0046274 P lignin catabolic process
GO:0046872 F metal ion binding
GO:0048046 C apoplast
GO:0052716 F hydroquinone:oxygen oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.34 TPM:1.30
3757 A_BomoIG_DN1664_c0_g1_i1
447bp
FPKM:0.20 TPM:0.11
3758 A_BomoIG_DN16655_c0_g1_i1
207bp
 inhibin_beta_A_chain-like_precursor_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3759 A_BomoIG_DN16658_c0_g1_i1
256bp
FPKM:0.00 TPM:0.00
3760 A_BomoIG_DN16659_c0_g1_i1
311bp
FPKM:1.96 TPM:1.09
3761 A_BomoIG_DN1665_c0_g1_i1
439bp
FPKM:1.63 TPM:0.91
3762 A_BomoIG_DN16661_c0_g1_i1
372bp
FPKM:1.59 TPM:0.89
3763 A_BomoIG_DN16664_c0_g1_i1
262bp
FPKM:0.35 TPM:0.20
3764 A_BomoIG_DN16665_c0_g1_i1
348bp
FPKM:0.60 TPM:0.33
3765 A_BomoIG_DN1666_c0_g1_i1
474bp
FPKM:0.00 TPM:0.00
3766 A_BomoIG_DN16677_c0_g1_i1
206bp
FPKM:0.00 TPM:0.00
3767 A_BomoIG_DN16679_c0_g1_i1
247bp
FPKM:0.20 TPM:0.11
3768 A_BomoIG_DN1667_c0_g1_i1
326bp
FPKM:0.11 TPM:0.06
3769 A_BomoIG_DN1667_c0_g2_i1
232bp
FPKM:1.69 TPM:0.94
3770 A_BomoIG_DN16680_c0_g1_i1
261bp
FPKM:0.00 TPM:0.00
3771 A_BomoIG_DN16681_c0_g1_i1
209bp
hypothetical_protein_PV08_11744_[Exophiala_spinifera]
FPKM:0.00 TPM:0.00
3772 A_BomoIG_DN16684_c0_g1_i1
464bp
FPKM:0.37 TPM:0.21
3773 A_BomoIG_DN16691_c0_g1_i1
270bp
FPKM:0.33 TPM:0.18
3774 A_BomoIG_DN16692_c0_g1_i1
243bp
 LOW_QUALITY_PROTEIN:_alanine_aminotransferase_1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004021 F L-alanine:2-oxoglutarate aminotransferase activity
GO:0005575 C cellular_component
GO:0006103 P 2-oxoglutarate metabolic process
GO:0008483 F transaminase activity
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0030170 F pyridoxal phosphate binding
GO:0042851 P L-alanine metabolic process
GO:0042853 P L-alanine catabolic process
FPKM:4.27 TPM:2.38
3775 A_BomoIG_DN16699_c0_g1_i1
351bp
FPKM:0.39 TPM:0.22
3776 A_BomoIG_DN1669_c0_g1_i1
214bp
FPKM:0.61 TPM:0.34
3777 A_BomoIG_DN16704_c0_g1_i1
283bp
FPKM:0.15 TPM:0.08
3778 A_BomoIG_DN16705_c0_g1_i1
305bp
FPKM:0.26 TPM:0.14
3779 A_BomoIG_DN16708_c0_g1_i1
315bp
FPKM:0.24 TPM:0.13
3780 A_BomoIG_DN16709_c0_g1_i1
257bp
FPKM:0.00 TPM:0.00
previous next from show/206471

- SilkBase 1999-2023 -