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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3601 A_BomoIG_DN16337_c0_g1_i1
426bp
hypothetical_protein_KV28_22970,_partial_[Enterobacter_hormaechei_subsp._oharae]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
GO:0071920 C cleavage body
FPKM:0.14 TPM:0.08
3602 A_BomoIG_DN1633_c0_g1_i1
278bp
FPKM:0.00 TPM:0.00
3603 A_BomoIG_DN16340_c0_g1_i1
598bp
FPKM:0.00 TPM:0.00
3604 A_BomoIG_DN16341_c0_g1_i1
228bp
FPKM:0.00 TPM:0.00
3605 A_BomoIG_DN16347_c0_g1_i1
335bp
 transposase_(clone_6.5)_-_almond_moth_transposon_mariner_(fragment)
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.00 TPM:0.00
3606 A_BomoIG_DN16349_c0_g1_i1
205bp
FPKM:0.00 TPM:0.00
3607 A_BomoIG_DN16351_c0_g1_i1
240bp
FPKM:0.88 TPM:0.49
3608 A_BomoIG_DN16352_c0_g1_i1
506bp
 uncharacterized_protein_LOC101742730_[Bombyx_mori]
FPKM:173.13 TPM:96.40
3609 A_BomoIG_DN16356_c0_g1_i1
210bp
 putative_epidermal_cell_surface_receptor,_partial_[Operophtera_brumata]
FPKM:0.00 TPM:0.00
3610 A_BomoIG_DN16357_c0_g1_i1
222bp
FPKM:0.27 TPM:0.15
3611 A_BomoIG_DN16358_c0_g1_i1
265bp
FPKM:0.69 TPM:0.38
3612 A_BomoIG_DN16359_c0_g1_i1
348bp
FPKM:0.80 TPM:0.44
3613 A_BomoIG_DN16361_c0_g1_i1
312bp
FPKM:0.12 TPM:0.07
3614 A_BomoIG_DN16363_c0_g1_i1
355bp
FPKM:0.00 TPM:0.00
3615 A_BomoIG_DN16363_c1_g1_i1
238bp
FPKM:1.35 TPM:0.75
3616 A_BomoIG_DN1636_c0_g1_i1
573bp
FPKM:0.09 TPM:0.05
3617 A_BomoIG_DN16371_c0_g1_i1
317bp
FPKM:0.12 TPM:0.07
3618 A_BomoIG_DN16373_c0_g1_i1
346bp
FPKM:0.20 TPM:0.11
3619 A_BomoIG_DN16377_c0_g1_i1
243bp
FPKM:0.00 TPM:0.00
3620 A_BomoIG_DN16381_c0_g1_i1
205bp
FPKM:0.35 TPM:0.20
3621 A_BomoIG_DN16381_c0_g1_i2
274bp
FPKM:0.00 TPM:0.00
3622 A_BomoIG_DN16383_c0_g1_i1
461bp
 histone-lysine_N-methyltransferase_SUV39H2_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030154 P cell differentiation
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0046872 F metal ion binding
FPKM:0.50 TPM:0.28
3623 A_BomoIG_DN1638_c0_g1_i1
293bp
FPKM:4.85 TPM:2.70
3624 A_BomoIG_DN16392_c0_g1_i1
217bp
FPKM:0.00 TPM:0.00
3625 A_BomoIG_DN16393_c0_g1_i1
229bp
FPKM:0.00 TPM:0.00
3626 A_BomoIG_DN16396_c0_g1_i1
204bp
FPKM:0.00 TPM:0.00
3627 A_BomoIG_DN16400_c0_g1_i1
226bp
FPKM:0.00 TPM:0.00
3628 A_BomoIG_DN16400_c0_g2_i1
212bp
FPKM:0.00 TPM:0.00
3629 A_BomoIG_DN16403_c0_g1_i1
241bp
FPKM:0.65 TPM:0.36
3630 A_BomoIG_DN16404_c0_g1_i1
202bp
FPKM:0.37 TPM:0.21
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