SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/206471
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3241 A_BomoIG_DN15616_c0_g1_i1
467bp
FPKM:0.43 TPM:0.24
3242 A_BomoIG_DN15617_c0_g1_i1
273bp
FPKM:0.32 TPM:0.18
3243 A_BomoIG_DN15618_c0_g1_i1
289bp
FPKM:0.14 TPM:0.08
3244 A_BomoIG_DN1561_c0_g1_i1
209bp
FPKM:0.00 TPM:0.00
3245 A_BomoIG_DN15620_c0_g1_i1
340bp
FPKM:0.42 TPM:0.23
3246 A_BomoIG_DN15622_c0_g1_i1
266bp
FPKM:0.34 TPM:0.19
3247 A_BomoIG_DN15623_c0_g1_i1
225bp
FPKM:0.79 TPM:0.44
3248 A_BomoIG_DN15625_c0_g1_i1
514bp
FPKM:0.86 TPM:0.48
3249 A_BomoIG_DN15626_c0_g1_i1
237bp
FPKM:0.00 TPM:0.00
3250 A_BomoIG_DN15628_c0_g1_i1
242bp
FPKM:1.94 TPM:1.08
3251 A_BomoIG_DN15628_c0_g2_i1
597bp
FPKM:1.44 TPM:0.80
3252 A_BomoIG_DN15634_c0_g1_i1
783bp
 LOW_QUALITY_PROTEIN:_multidrug_resistance-associated_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:0.74 TPM:0.41
3253 A_BomoIG_DN15635_c0_g1_i1
447bp
FPKM:0.07 TPM:0.04
3254 A_BomoIG_DN15636_c0_g1_i1
1765bp
FPKM:0.13 TPM:0.07
3255 A_BomoIG_DN15636_c0_g1_i2
1846bp
FPKM:0.17 TPM:0.09
3256 A_BomoIG_DN15637_c0_g1_i1
229bp
FPKM:0.25 TPM:0.14
3257 A_BomoIG_DN15639_c0_g1_i1
563bp
 PREDICTED:_uncharacterized_protein_LOC105384422_[Plutella_xylostella]
FPKM:3.12 TPM:1.74
3258 A_BomoIG_DN15641_c0_g1_i1
306bp
FPKM:0.25 TPM:0.14
3259 A_BomoIG_DN15642_c0_g1_i1
409bp
FPKM:0.00 TPM:0.00
3260 A_BomoIG_DN15644_c0_g1_i1
231bp
FPKM:0.73 TPM:0.41
3261 A_BomoIG_DN15645_c0_g1_i1
225bp
FPKM:0.00 TPM:0.00
3262 A_BomoIG_DN15646_c0_g1_i1
298bp
 NADH-ubiquinone_oxidoreductase_49_kDa_subunit_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003954 F NADH dehydrogenase activity
GO:0005575 C cellular_component
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0006979 P response to oxidative stress
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0031625 F ubiquitin protein ligase binding
GO:0046872 F metal ion binding
GO:0048038 F quinone binding
GO:0051287 F NAD binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:0.00 TPM:0.00
3263 A_BomoIG_DN15648_c0_g1_i1
532bp
 monocarboxylate_transporter_5_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008028 F monocarboxylic acid transmembrane transporter activity
GO:0015129 F lactate transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015718 P monocarboxylic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035873 P lactate transmembrane transport
GO:0035879 P plasma membrane lactate transport
GO:0050833 F pyruvate transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:1901475 P pyruvate transmembrane transport
FPKM:0.31 TPM:0.17
3264 A_BomoIG_DN1564_c0_g1_i1
417bp
FPKM:0.00 TPM:0.00
3265 A_BomoIG_DN15656_c0_g1_i1
276bp
 kinesin-like_protein_KIF12_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0070062 C extracellular exosome
FPKM:0.00 TPM:0.00
3266 A_BomoIG_DN15659_c0_g1_i1
334bp
FPKM:4.39 TPM:2.45
3267 A_BomoIG_DN15660_c0_g1_i1
350bp
FPKM:0.30 TPM:0.16
3268 A_BomoIG_DN15661_c0_g1_i1
209bp
FPKM:0.33 TPM:0.18
3269 A_BomoIG_DN15662_c0_g1_i1
305bp
FPKM:0.00 TPM:0.00
3270 A_BomoIG_DN15664_c0_g1_i1
218bp
FPKM:0.00 TPM:0.00
previous next from show/206471

- SilkBase 1999-2023 -