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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2971 A_BomoIG_DN15185_c0_g2_i1
311bp
FPKM:0.25 TPM:0.14
2972 A_BomoIG_DN15191_c0_g1_i1
503bp
FPKM:0.00 TPM:0.00
2973 A_BomoIG_DN15192_c0_g1_i1
293bp
 meiotic_recombination_protein_SPO11_[Bombyx_mori]
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000781 C chromosome, telomeric region
GO:0001541 P ovarian follicle development
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0003918 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006259 P DNA metabolic process
GO:0007129 P homologous chromosome pairing at meiosis
GO:0007130 P synaptonemal complex assembly
GO:0007131 P reciprocal meiotic recombination
GO:0007141 P male meiosis I
GO:0007286 P spermatid development
GO:0016787 F hydrolase activity
GO:0016888 F endodeoxyribonuclease activity, producing 5'-phosphomonoesters
GO:0034502 P protein localization to chromosome
GO:0045141 P meiotic telomere clustering
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0051321 P meiotic cell cycle
FPKM:0.42 TPM:0.23
2974 A_BomoIG_DN15192_c0_g1_i2
326bp
 meiotic_recombination_protein_SPO11_[Bombyx_mori]
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000781 C chromosome, telomeric region
GO:0001541 P ovarian follicle development
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0003918 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006259 P DNA metabolic process
GO:0007129 P homologous chromosome pairing at meiosis
GO:0007130 P synaptonemal complex assembly
GO:0007131 P reciprocal meiotic recombination
GO:0007141 P male meiosis I
GO:0007286 P spermatid development
GO:0016787 F hydrolase activity
GO:0016888 F endodeoxyribonuclease activity, producing 5'-phosphomonoesters
GO:0034502 P protein localization to chromosome
GO:0045141 P meiotic telomere clustering
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0051321 P meiotic cell cycle
FPKM:0.00 TPM:0.00
2975 A_BomoIG_DN15196_c0_g1_i1
261bp
FPKM:0.18 TPM:0.10
2976 A_BomoIG_DN1519_c0_g1_i1
221bp
FPKM:0.83 TPM:0.46
2977 A_BomoIG_DN151_c0_g1_i1
431bp
FPKM:1.75 TPM:0.97
2978 A_BomoIG_DN15201_c0_g1_i1
218bp
FPKM:0.29 TPM:0.16
2979 A_BomoIG_DN15203_c0_g1_i1
447bp
FPKM:0.46 TPM:0.26
2980 A_BomoIG_DN15203_c0_g1_i2
283bp
FPKM:0.01 TPM:0.00
2981 A_BomoIG_DN15204_c0_g1_i1
1687bp
 AMP-activated_protein_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003682 F chromatin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004679 F AMP-activated protein kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006694 P steroid biosynthetic process
GO:0006695 P cholesterol biosynthetic process
GO:0006853 P carnitine shuttle
GO:0006914 P autophagy
GO:0006950 P response to stress
GO:0007050 P regulation of cell cycle
GO:0007165 P signal transduction
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008610 P lipid biosynthetic process
GO:0010468 P regulation of gene expression
GO:0010508 P positive regulation of autophagy
GO:0014850 P response to muscle activity
GO:0016055 P Wnt signaling pathway
GO:0016126 P sterol biosynthetic process
GO:0016236 P macroautophagy
GO:0016239 P positive regulation of macroautophagy
GO:0016241 P regulation of macroautophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0031588 C nucleotide-activated protein kinase complex
GO:0031669 P cellular response to nutrient levels
GO:0032007 P negative regulation of TOR signaling
GO:0035174 F histone serine kinase activity
GO:0035404 P histone-serine phosphorylation
GO:0035556 P intracellular signal transduction
GO:0035690 P cellular response to xenobiotic stimulus
GO:0042149 P cellular response to glucose starvation
GO:0042304 P regulation of fatty acid biosynthetic process
GO:0042593 P glucose homeostasis
GO:0042752 P regulation of circadian rhythm
GO:0043066 P negative regulation of apoptotic process
GO:0045821 P positive regulation of glycolytic process
GO:0046872 F metal ion binding
GO:0047322 F [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity
GO:0048511 P rhythmic process
GO:0050405 F [acetyl-CoA carboxylase] kinase activity
GO:0055089 P fatty acid homeostasis
GO:0071380 P cellular response to prostaglandin E stimulus
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:2000505 P energy homeostasis
FPKM:25.19 TPM:14.02
2982 A_BomoIG_DN15208_c0_g1_i1
244bp
FPKM:0.42 TPM:0.24
2983 A_BomoIG_DN15209_c0_g1_i1
293bp
FPKM:0.42 TPM:0.23
2984 A_BomoIG_DN15210_c0_g1_i1
248bp
FPKM:1.01 TPM:0.56
2985 A_BomoIG_DN15213_c0_g1_i1
321bp
FPKM:0.00 TPM:0.00
2986 A_BomoIG_DN15213_c0_g2_i1
224bp
FPKM:0.00 TPM:0.00
2987 A_BomoIG_DN15215_c0_g1_i1
479bp
FPKM:0.00 TPM:0.00
2988 A_BomoIG_DN15215_c0_g2_i1
225bp
FPKM:0.00 TPM:0.00
2989 A_BomoIG_DN15216_c0_g1_i1
230bp
FPKM:0.25 TPM:0.14
2990 A_BomoIG_DN15217_c0_g1_i1
531bp
 uncharacterized_protein_LOC101742420_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2991 A_BomoIG_DN15219_c0_g1_i1
246bp
FPKM:1.45 TPM:0.81
2992 A_BomoIG_DN15221_c0_g1_i1
220bp
FPKM:0.00 TPM:0.00
2993 A_BomoIG_DN15222_c0_g1_i1
238bp
FPKM:0.00 TPM:0.00
2994 A_BomoIG_DN15223_c0_g1_i1
211bp
FPKM:0.00 TPM:0.00
2995 A_BomoIG_DN15224_c0_g1_i1
234bp
FPKM:0.71 TPM:0.39
2996 A_BomoIG_DN15227_c0_g1_i1
272bp
FPKM:0.00 TPM:0.00
2997 A_BomoIG_DN1522_c0_g1_i1
461bp
FPKM:0.00 TPM:0.00
2998 A_BomoIG_DN1522_c0_g1_i2
507bp
FPKM:0.00 TPM:0.00
2999 A_BomoIG_DN15230_c0_g1_i1
546bp
 Cyclic_nucleotide-gated_channel_rod_photoreceptor_subunit_alpha_[Papilio_xuthus]
FPKM:0.00 TPM:0.00
3000 A_BomoIG_DN15233_c0_g1_i1
224bp
FPKM:0.27 TPM:0.15
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