SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/206471
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2581 A_BomoIG_DN14519_c0_g1_i1
206bp
FPKM:0.00 TPM:0.00
2582 A_BomoIG_DN1451_c0_g1_i1
202bp
FPKM:0.00 TPM:0.00
2583 A_BomoIG_DN14521_c0_g1_i1
494bp
FPKM:0.00 TPM:0.00
2584 A_BomoIG_DN14523_c0_g1_i1
291bp
FPKM:1.97 TPM:1.09
2585 A_BomoIG_DN14524_c0_g1_i1
354bp
FPKM:0.19 TPM:0.11
2586 A_BomoIG_DN14524_c0_g2_i1
300bp
FPKM:0.53 TPM:0.29
2587 A_BomoIG_DN14529_c0_g1_i1
203bp
FPKM:0.73 TPM:0.40
2588 A_BomoIG_DN1452_c0_g1_i1
235bp
 serine_proteinase_stubble_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2589 A_BomoIG_DN14534_c0_g1_i1
284bp
FPKM:0.44 TPM:0.25
2590 A_BomoIG_DN14535_c0_g1_i1
379bp
FPKM:0.43 TPM:0.24
2591 A_BomoIG_DN14538_c0_g1_i1
515bp
FPKM:0.64 TPM:0.36
2592 A_BomoIG_DN14541_c0_g1_i1
255bp
FPKM:0.57 TPM:0.32
2593 A_BomoIG_DN14545_c0_g1_i1
266bp
FPKM:0.34 TPM:0.19
2594 A_BomoIG_DN14546_c0_g1_i1
241bp
 uncharacterized_protein_LOC101745199_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2595 A_BomoIG_DN14547_c0_g1_i1
463bp
FPKM:0.31 TPM:0.17
2596 A_BomoIG_DN14549_c0_g1_i1
239bp
FPKM:1.12 TPM:0.62
2597 A_BomoIG_DN14551_c0_g1_i1
212bp
FPKM:0.00 TPM:0.00
2598 A_BomoIG_DN14552_c0_g1_i1
281bp
FPKM:0.45 TPM:0.25
2599 A_BomoIG_DN14554_c0_g1_i1
270bp
FPKM:0.17 TPM:0.09
2600 A_BomoIG_DN14556_c0_g1_i1
529bp
 caspase-8_[Bombyx_mori]
GO:0002376 P immune system process
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008656 F cysteine-type endopeptidase activator activity involved in apoptotic process
GO:0016787 F hydrolase activity
GO:0045087 P innate immune response
GO:0050829 P defense response to Gram-negative bacterium
FPKM:3.10 TPM:1.72
2601 A_BomoIG_DN14558_c0_g1_i1
264bp
FPKM:0.00 TPM:0.00
2602 A_BomoIG_DN1455_c0_g1_i1
278bp
FPKM:0.00 TPM:0.00
2603 A_BomoIG_DN14560_c0_g1_i1
361bp
 uncharacterized_protein_LOC110386318_[Bombyx_mori]
FPKM:3.17 TPM:1.77
2604 A_BomoIG_DN14562_c0_g1_i1
229bp
FPKM:0.50 TPM:0.28
2605 A_BomoIG_DN14564_c0_g1_i1
279bp
FPKM:0.46 TPM:0.26
2606 A_BomoIG_DN14566_c0_g1_i1
296bp
 TRASDJ,_partial_[Saturnia_japonica]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.41 TPM:0.23
2607 A_BomoIG_DN14566_c0_g2_i1
236bp
 TRASDJ,_partial_[Saturnia_japonica]
FPKM:3.00 TPM:1.67
2608 A_BomoIG_DN14567_c0_g1_i1
215bp
FPKM:0.00 TPM:0.00
2609 A_BomoIG_DN14569_c0_g1_i1
1342bp
 nuclear_migration_protein_nudC_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0051301 P cell division
FPKM:36.58 TPM:20.37
2610 A_BomoIG_DN1456_c0_g1_i1
215bp
FPKM:0.30 TPM:0.17
previous next from show/206471

- SilkBase 1999-2023 -