SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/206471
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2281 A_BomoIG_DN14065_c0_g1_i1
290bp
FPKM:0.00 TPM:0.00
2282 A_BomoIG_DN14065_c0_g2_i1
443bp
FPKM:0.40 TPM:0.22
2283 A_BomoIG_DN14067_c0_g1_i1
1071bp
FPKM:0.28 TPM:0.16
2284 A_BomoIG_DN14067_c0_g1_i2
697bp
FPKM:0.59 TPM:0.33
2285 A_BomoIG_DN14069_c0_g1_i1
436bp
 olfactory_receptor_[Bombyx_mori]
FPKM:0.41 TPM:0.23
2286 A_BomoIG_DN14070_c0_g1_i1
496bp
 phosphatidylinositol_3-kinase_catalytic_subunit_type_3_[Danaus_plexippus_plexippus]
FPKM:1.47 TPM:0.82
2287 A_BomoIG_DN14072_c0_g1_i1
591bp
 kinesin-like_protein_KIF23_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0000910 P cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005925 C focal adhesion
GO:0007018 P microtubule-based movement
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0030496 C midbody
GO:0032467 P positive regulation of cytokinesis
GO:0045171 C intercellular bridge
GO:0051256 P mitotic spindle midzone assembly
GO:0051301 P cell division
GO:0072383 P plus-end-directed vesicle transport along microtubule
GO:0072686 C mitotic spindle
GO:0097149 C centralspindlin complex
FPKM:0.80 TPM:0.44
2288 A_BomoIG_DN14072_c0_g2_i1
678bp
 kinesin-like_protein_KIF23_[Bombyx_mori]
FPKM:0.85 TPM:0.47
2289 A_BomoIG_DN14074_c0_g1_i1
351bp
FPKM:0.20 TPM:0.11
2290 A_BomoIG_DN14074_c0_g2_i1
332bp
FPKM:0.22 TPM:0.12
2291 A_BomoIG_DN14075_c0_g1_i1
1417bp
 acyl-CoA-binding_domain-containing_protein_6-like_isoform_X1_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0005737 C cytoplasm
GO:0008289 F lipid binding
FPKM:27.90 TPM:15.53
2292 A_BomoIG_DN14075_c0_g1_i2
1872bp
 Acyl-CoA_binding_protein_[Danaus_plexippus_plexippus]
GO:0005737 C cytoplasm
GO:0008168 F methyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0032259 P methylation
FPKM:16.35 TPM:9.10
2293 A_BomoIG_DN14078_c0_g1_i1
369bp
FPKM:0.63 TPM:0.35
2294 A_BomoIG_DN14082_c0_g1_i1
297bp
FPKM:0.40 TPM:0.22
2295 A_BomoIG_DN14084_c0_g1_i1
308bp
FPKM:0.00 TPM:0.00
2296 A_BomoIG_DN14086_c0_g1_i1
316bp
FPKM:0.24 TPM:0.13
2297 A_BomoIG_DN14087_c0_g1_i1
781bp
FPKM:0.80 TPM:0.45
2298 A_BomoIG_DN14088_c0_g1_i1
206bp
FPKM:0.00 TPM:0.00
2299 A_BomoIG_DN14089_c0_g1_i1
320bp
FPKM:0.12 TPM:0.06
2300 A_BomoIG_DN1408_c0_g1_i1
426bp
FPKM:0.00 TPM:0.00
2301 A_BomoIG_DN14095_c0_g1_i1
225bp
FPKM:1.84 TPM:1.03
2302 A_BomoIG_DN14096_c0_g1_i1
253bp
FPKM:1.16 TPM:0.64
2303 A_BomoIG_DN1409_c0_g1_i1
319bp
 hypothetical_protein_[Escherichia_coli]
FPKM:0.12 TPM:0.07
2304 A_BomoIG_DN140_c0_g1_i1
441bp
FPKM:0.67 TPM:0.38
2305 A_BomoIG_DN14100_c0_g1_i1
307bp
FPKM:1.01 TPM:0.56
2306 A_BomoIG_DN14101_c0_g1_i1
206bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_ZBED8-like_[Bactrocera_latifrons]
FPKM:1.73 TPM:0.96
2307 A_BomoIG_DN14102_c0_g1_i1
276bp
FPKM:0.00 TPM:0.00
2308 A_BomoIG_DN14104_c0_g1_i1
294bp
FPKM:0.96 TPM:0.54
2309 A_BomoIG_DN14105_c0_g1_i1
298bp
FPKM:0.94 TPM:0.52
2310 A_BomoIG_DN14106_c0_g1_i1
1471bp
 aliphatic_nitrilase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003837 F beta-ureidopropionase activity
GO:0005737 C cytoplasm
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0019483 P beta-alanine biosynthetic process
GO:0046872 F metal ion binding
FPKM:80.17 TPM:44.64
previous next from show/206471

- SilkBase 1999-2023 -