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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1951 A_BomoIG_DN1341_c0_g1_i1
593bp
FPKM:0.35 TPM:0.20
1952 A_BomoIG_DN13421_c0_g1_i1
258bp
FPKM:0.37 TPM:0.20
1953 A_BomoIG_DN13424_c0_g1_i1
201bp
FPKM:0.00 TPM:0.00
1954 A_BomoIG_DN13425_c0_g1_i1
240bp
FPKM:1.32 TPM:0.74
1955 A_BomoIG_DN13430_c0_g1_i1
401bp
FPKM:0.16 TPM:0.09
1956 A_BomoIG_DN13431_c0_g1_i1
629bp
 Mariner_Mos1_transposase,_partial_[Acromyrmex_echinatior]
FPKM:0.12 TPM:0.07
1957 A_BomoIG_DN13432_c0_g1_i1
387bp
FPKM:0.33 TPM:0.18
1958 A_BomoIG_DN13438_c0_g1_i1
320bp
FPKM:0.00 TPM:0.00
1959 A_BomoIG_DN1343_c0_g1_i1
402bp
FPKM:0.86 TPM:0.48
1960 A_BomoIG_DN1343_c0_g2_i1
244bp
FPKM:0.21 TPM:0.12
1961 A_BomoIG_DN13440_c0_g1_i1
275bp
FPKM:0.79 TPM:0.44
1962 A_BomoIG_DN13441_c0_g1_i1
256bp
FPKM:1.50 TPM:0.83
1963 A_BomoIG_DN13443_c0_g1_i1
403bp
FPKM:0.54 TPM:0.30
1964 A_BomoIG_DN13444_c0_g1_i1
733bp
FPKM:0.47 TPM:0.26
1965 A_BomoIG_DN1344_c0_g1_i1
274bp
FPKM:0.00 TPM:0.00
1966 A_BomoIG_DN13453_c0_g1_i1
454bp
FPKM:0.00 TPM:0.00
1967 A_BomoIG_DN1345_c0_g1_i1
344bp
FPKM:0.20 TPM:0.11
1968 A_BomoIG_DN13462_c0_g1_i1
208bp
FPKM:0.00 TPM:0.00
1969 A_BomoIG_DN13463_c0_g1_i1
240bp
FPKM:0.66 TPM:0.37
1970 A_BomoIG_DN13465_c0_g1_i1
510bp
FPKM:0.16 TPM:0.09
1971 A_BomoIG_DN1346_c0_g1_i1
416bp
FPKM:1.11 TPM:0.62
1972 A_BomoIG_DN13471_c0_g1_i1
273bp
 transposase_(clone_6.5)_-_almond_moth_transposon_mariner_(fragment)
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.48 TPM:0.27
1973 A_BomoIG_DN13472_c0_g1_i1
247bp
FPKM:0.00 TPM:0.00
1974 A_BomoIG_DN13479_c0_g1_i1
509bp
FPKM:0.71 TPM:0.39
1975 A_BomoIG_DN13484_c0_g1_i1
318bp
FPKM:0.12 TPM:0.07
1976 A_BomoIG_DN13488_c0_g1_i1
214bp
FPKM:0.00 TPM:0.00
1977 A_BomoIG_DN13489_c0_g1_i1
293bp
FPKM:0.28 TPM:0.15
1978 A_BomoIG_DN1348_c0_g1_i1
364bp
FPKM:0.09 TPM:0.05
1979 A_BomoIG_DN13493_c0_g1_i1
265bp
FPKM:0.00 TPM:0.00
1980 A_BomoIG_DN13496_c0_g1_i1
212bp
FPKM:0.00 TPM:0.00
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