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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1 A_BomoIG_DN10000_c0_g1_i1
921bp
FPKM:1.11 TPM:0.62
2 A_BomoIG_DN10003_c0_g1_i1
396bp
FPKM:0.32 TPM:0.18
3 A_BomoIG_DN10008_c0_g1_i1
770bp
FPKM:0.25 TPM:0.14
4 A_BomoIG_DN10008_c0_g2_i1
209bp
FPKM:0.00 TPM:0.00
5 A_BomoIG_DN10009_c0_g1_i1
519bp
 Dynein_heavy_chain_2,_axonemal_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0001539 P cilium or flagellum-dependent cell motility
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005858 C axonemal dynein complex
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0030286 C dynein complex
GO:0042995 C cell projection
FPKM:0.00 TPM:0.00
6 A_BomoIG_DN10014_c0_g1_i1
447bp
FPKM:0.73 TPM:0.40
7 A_BomoIG_DN10017_c0_g1_i1
317bp
FPKM:0.95 TPM:0.53
8 A_BomoIG_DN10018_c0_g1_i1
521bp
FPKM:1.53 TPM:0.85
9 A_BomoIG_DN1001_c0_g1_i1
279bp
FPKM:0.15 TPM:0.09
10 A_BomoIG_DN10022_c0_g1_i1
391bp
FPKM:1.14 TPM:0.64
11 A_BomoIG_DN10024_c0_g1_i1
260bp
FPKM:0.00 TPM:0.00
12 A_BomoIG_DN10025_c0_g1_i1
527bp
FPKM:2.02 TPM:1.13
13 A_BomoIG_DN10026_c0_g1_i1
366bp
FPKM:0.73 TPM:0.41
14 A_BomoIG_DN10028_c0_g1_i1
320bp
 transient-receptor-potential-like_protein_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0005262 F calcium channel activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006816 P calcium ion transport
GO:0006828 P manganese ion transport
GO:0007589 P body fluid secretion
GO:0007601 P visual perception
GO:0007603 P phototransduction, visible light
GO:0007605 P sensory perception of sound
GO:0009416 P response to light stimulus
GO:0010461 F light-activated ion channel activity
GO:0015075 F ion transmembrane transporter activity
GO:0015279 F store-operated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016027 C inaD signaling complex
GO:0016028 C rhabdomere
GO:0019722 P calcium-mediated signaling
GO:0030425 C dendrite
GO:0034703 C cation channel complex
GO:0035997 C rhabdomere microvillus membrane
GO:0042802 F identical protein binding
GO:0046982 F protein heterodimerization activity
GO:0050896 P response to stimulus
GO:0050908 P detection of light stimulus involved in visual perception
GO:0051480 P regulation of cytosolic calcium ion concentration
GO:0055085 P transmembrane transport
GO:0070588 P calcium ion transmembrane transport
GO:0071454 P cellular response to anoxia
FPKM:0.00 TPM:0.00
15 A_BomoIG_DN10029_c0_g1_i1
265bp
 uncharacterized_protein_LOC105842416_[Bombyx_mori]
FPKM:0.00 TPM:0.00
16 A_BomoIG_DN10032_c0_g1_i1
201bp
FPKM:0.75 TPM:0.42
17 A_BomoIG_DN10034_c0_g1_i1
203bp
FPKM:0.73 TPM:0.40
18 A_BomoIG_DN10034_c0_g2_i1
381bp
FPKM:0.43 TPM:0.24
19 A_BomoIG_DN10036_c0_g1_i1
235bp
FPKM:0.00 TPM:0.00
20 A_BomoIG_DN10036_c0_g2_i1
300bp
FPKM:0.00 TPM:0.00
21 A_BomoIG_DN10037_c0_g1_i1
317bp
 Regulator_of_G-protein_signaling_loco_[Papilio_xuthus]
GO:0000578 P embryonic axis specification
GO:0001965 F G-protein alpha-subunit binding
GO:0003015 P heart process
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005092 F GDP-dissociation inhibitor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006979 P response to oxidative stress
GO:0007049 P cell cycle
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007419 P ventral cord development
GO:0008069 P dorsal/ventral axis specification, ovarian follicular epithelium
GO:0008105 P protein localization
GO:0008277 P regulation of G protein-coupled receptor signaling pathway
GO:0009408 P response to heat
GO:0009786 P regulation of asymmetric cell division
GO:0010001 P glial cell differentiation
GO:0014045 P establishment of endothelial blood-brain barrier
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0019991 P septate junction assembly
GO:0030154 P cell differentiation
GO:0030695 F GTPase regulator activity
GO:0030866 P cortical actin cytoskeleton organization
GO:0032291 P axon ensheathment in central nervous system
GO:0042594 P response to starvation
GO:0043547 P positive regulation of GTPase activity
GO:0045179 C apical cortex
GO:0048477 P oogenesis
GO:0050790 P regulation of catalytic activity
GO:0050832 P defense response to fungus
GO:0051301 P cell division
GO:0055059 P asymmetric neuroblast division
GO:0060857 P establishment of glial blood-brain barrier
FPKM:0.35 TPM:0.20
22 A_BomoIG_DN1003_c0_g1_i1
297bp
FPKM:0.27 TPM:0.15
23 A_BomoIG_DN10040_c0_g1_i1
262bp
FPKM:0.00 TPM:0.00
24 A_BomoIG_DN10044_c0_g1_i1
345bp
FPKM:0.20 TPM:0.11
25 A_BomoIG_DN10045_c0_g1_i1
353bp
FPKM:1.26 TPM:0.70
26 A_BomoIG_DN10047_c0_g1_i1
287bp
FPKM:0.72 TPM:0.40
27 A_BomoIG_DN10050_c0_g1_i1
365bp
 hypothetical_protein_[Escherichia_coli]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.46 TPM:0.25
28 A_BomoIG_DN10052_c0_g1_i1
1278bp
 uncharacterized_protein_LOC101738605_[Bombyx_mori]
FPKM:0.48 TPM:0.27
29 A_BomoIG_DN10053_c0_g1_i1
321bp
FPKM:0.00 TPM:0.00
30 A_BomoIG_DN10055_c0_g1_i1
351bp
FPKM:0.88 TPM:0.49
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