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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6151 A_BomoBR_DN20052_c0_g1_i1
262bp
FPKM:0.00 TPM:0.00
6152 A_BomoBR_DN20054_c0_g1_i1
314bp
FPKM:0.00 TPM:0.00
6153 A_BomoBR_DN20059_c0_g1_i1
398bp
 ATP-binding_cassette_sub-family_G_member_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010888 P negative regulation of lipid storage
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0055037 C recycling endosome
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
FPKM:0.00 TPM:0.00
6154 A_BomoBR_DN2005_c0_g1_i1
276bp
FPKM:0.00 TPM:0.00
6155 A_BomoBR_DN2005_c0_g2_i1
334bp
FPKM:0.00 TPM:0.00
6156 A_BomoBR_DN20060_c0_g1_i1
375bp
FPKM:0.00 TPM:0.00
6157 A_BomoBR_DN20061_c0_g1_i1
503bp
FPKM:0.00 TPM:0.00
6158 A_BomoBR_DN20062_c0_g1_i1
222bp
FPKM:0.00 TPM:0.00
6159 A_BomoBR_DN20063_c0_g1_i1
271bp
FPKM:0.00 TPM:0.00
6160 A_BomoBR_DN20064_c0_g1_i1
247bp
 uncharacterized_protein_LOC110386479_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005737 C cytoplasm
GO:0006401 P RNA catabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:0.00 TPM:0.00
6161 A_BomoBR_DN20065_c0_g1_i1
295bp
FPKM:0.00 TPM:0.00
6162 A_BomoBR_DN20066_c0_g1_i1
350bp
FPKM:0.00 TPM:0.00
6163 A_BomoBR_DN20069_c0_g1_i1
308bp
FPKM:0.00 TPM:0.00
6164 A_BomoBR_DN20070_c0_g1_i1
463bp
FPKM:0.00 TPM:0.00
6165 A_BomoBR_DN20070_c0_g2_i1
215bp
FPKM:0.00 TPM:0.00
6166 A_BomoBR_DN20073_c0_g1_i1
279bp
FPKM:0.00 TPM:0.00
6167 A_BomoBR_DN20076_c0_g1_i1
352bp
FPKM:0.00 TPM:0.00
6168 A_BomoBR_DN20080_c0_g1_i1
245bp
FPKM:0.00 TPM:0.00
6169 A_BomoBR_DN20082_c0_g1_i1
277bp
FPKM:0.00 TPM:0.00
6170 A_BomoBR_DN20085_c0_g1_i1
234bp
 uncharacterized_protein_LOC101747221_isoform_X1_[Bombyx_mori]
FPKM:0.00 TPM:0.00
6171 A_BomoBR_DN20085_c0_g2_i1
224bp
 uncharacterized_protein_LOC101747221_isoform_X2_[Bombyx_mori]
FPKM:0.00 TPM:0.00
6172 A_BomoBR_DN20089_c0_g1_i1
442bp
FPKM:0.00 TPM:0.00
6173 A_BomoBR_DN20092_c0_g1_i1
455bp
 uncharacterized_protein_LOC101738890_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.00 TPM:0.00
6174 A_BomoBR_DN20095_c0_g1_i1
385bp
FPKM:0.00 TPM:0.00
6175 A_BomoBR_DN20098_c0_g1_i1
576bp
FPKM:0.00 TPM:0.00
6176 A_BomoBR_DN200_c0_g1_i1
207bp
FPKM:0.00 TPM:0.00
6177 A_BomoBR_DN20100_c0_g1_i1
208bp
FPKM:0.00 TPM:0.00
6178 A_BomoBR_DN20101_c0_g1_i1
234bp
FPKM:0.00 TPM:0.00
6179 A_BomoBR_DN20103_c0_g1_i1
220bp
FPKM:0.00 TPM:0.00
6180 A_BomoBR_DN20104_c0_g1_i1
288bp
FPKM:0.00 TPM:0.00
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