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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5371 A_BomoBR_DN18715_c0_g2_i1
252bp
FPKM:0.00 TPM:0.00
5372 A_BomoBR_DN18724_c0_g1_i1
237bp
FPKM:0.00 TPM:0.00
5373 A_BomoBR_DN18725_c0_g1_i1
202bp
FPKM:0.00 TPM:0.00
5374 A_BomoBR_DN18728_c0_g1_i1
214bp
FPKM:0.00 TPM:0.00
5375 A_BomoBR_DN1872_c0_g1_i1
227bp
FPKM:0.00 TPM:0.00
5376 A_BomoBR_DN18730_c0_g1_i1
382bp
FPKM:0.00 TPM:0.00
5377 A_BomoBR_DN18731_c0_g1_i1
308bp
FPKM:0.00 TPM:0.00
5378 A_BomoBR_DN18733_c0_g1_i1
246bp
FPKM:0.00 TPM:0.00
5379 A_BomoBR_DN18733_c0_g2_i1
389bp
FPKM:0.00 TPM:0.00
5380 A_BomoBR_DN18735_c0_g1_i1
1061bp
 alpha-ketoglutarate-dependent_dioxygenase_alkB_homolog_4_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006482 P protein demethylation
GO:0016491 F oxidoreductase activity
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0030496 C midbody
GO:0031032 P actomyosin structure organization
GO:0032451 F demethylase activity
GO:0036090 P cleavage furrow ingression
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070938 C contractile ring
GO:0070988 P demethylation
FPKM:0.00 TPM:0.00
5381 A_BomoBR_DN18735_c0_g1_i2
1192bp
 alpha-ketoglutarate-dependent_dioxygenase_alkB_homolog_4_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006482 P protein demethylation
GO:0016491 F oxidoreductase activity
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0030496 C midbody
GO:0031032 P actomyosin structure organization
GO:0032451 F demethylase activity
GO:0036090 P cleavage furrow ingression
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070938 C contractile ring
GO:0070988 P demethylation
FPKM:0.00 TPM:0.00
5382 A_BomoBR_DN18740_c0_g1_i1
296bp
FPKM:0.00 TPM:0.00
5383 A_BomoBR_DN18741_c0_g1_i1
340bp
FPKM:0.00 TPM:0.00
5384 A_BomoBR_DN18743_c0_g1_i1
493bp
FPKM:0.00 TPM:0.00
5385 A_BomoBR_DN18743_c0_g1_i2
727bp
FPKM:0.00 TPM:0.00
5386 A_BomoBR_DN18744_c0_g1_i1
294bp
FPKM:0.00 TPM:0.00
5387 A_BomoBR_DN18745_c0_g1_i1
748bp
FPKM:0.00 TPM:0.00
5388 A_BomoBR_DN18746_c0_g1_i1
269bp
FPKM:0.00 TPM:0.00
5389 A_BomoBR_DN18747_c0_g1_i1
250bp
FPKM:0.00 TPM:0.00
5390 A_BomoBR_DN18748_c0_g1_i1
321bp
FPKM:0.00 TPM:0.00
5391 A_BomoBR_DN18756_c0_g1_i1
211bp
FPKM:0.00 TPM:0.00
5392 A_BomoBR_DN18758_c0_g1_i1
202bp
 PREDICTED:_uncharacterized_protein_LOC106715194_[Papilio_machaon]
FPKM:0.00 TPM:0.00
5393 A_BomoBR_DN18758_c0_g2_i1
635bp
FPKM:0.00 TPM:0.00
5394 A_BomoBR_DN1875_c0_g1_i1
348bp
 rho_GTPase-activating_protein_6_isoform_X2_[Bombyx_mori]
FPKM:0.00 TPM:0.00
5395 A_BomoBR_DN18760_c0_g1_i1
240bp
FPKM:0.00 TPM:0.00
5396 A_BomoBR_DN18762_c0_g1_i1
914bp
 glycine_receptor_subunit_alpha-2_[Bombyx_mori]
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0005254 F chloride channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0007218 P neuropeptide signaling pathway
GO:0009897 C external side of plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016594 F glycine binding
GO:0016934 F extracellularly glycine-gated chloride channel activity
GO:0016935 C glycine-gated chloride channel complex
GO:0022824 F transmitter-gated ion channel activity
GO:0022852 F glycine-gated chloride ion channel activity
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0034707 C chloride channel complex
GO:0042995 C cell projection
GO:0043113 P receptor clustering
GO:0043200 P response to amino acid
GO:0043204 C perikaryon
GO:0043679 C axon terminus
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046872 F metal ion binding
GO:0051260 P protein homooligomerization
GO:0060012 P synaptic transmission, glycinergic
GO:0072578 P neurotransmitter-gated ion channel clustering
GO:0097112 P gamma-aminobutyric acid receptor clustering
GO:0099565 P chemical synaptic transmission, postsynaptic
GO:1902476 P chloride transmembrane transport
FPKM:0.00 TPM:0.00
5397 A_BomoBR_DN18762_c0_g1_i2
920bp
 glycine_receptor_subunit_alpha-2_[Bombyx_mori]
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0005254 F chloride channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0007218 P neuropeptide signaling pathway
GO:0009897 C external side of plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016594 F glycine binding
GO:0016934 F extracellularly glycine-gated chloride channel activity
GO:0016935 C glycine-gated chloride channel complex
GO:0022824 F transmitter-gated ion channel activity
GO:0022852 F glycine-gated chloride ion channel activity
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0034707 C chloride channel complex
GO:0042995 C cell projection
GO:0043113 P receptor clustering
GO:0043200 P response to amino acid
GO:0043204 C perikaryon
GO:0043679 C axon terminus
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046872 F metal ion binding
GO:0051260 P protein homooligomerization
GO:0060012 P synaptic transmission, glycinergic
GO:0072578 P neurotransmitter-gated ion channel clustering
GO:0097112 P gamma-aminobutyric acid receptor clustering
GO:0099565 P chemical synaptic transmission, postsynaptic
GO:1902476 P chloride transmembrane transport
FPKM:0.00 TPM:0.00
5398 A_BomoBR_DN18766_c0_g1_i1
202bp
FPKM:0.00 TPM:0.00
5399 A_BomoBR_DN18768_c0_g1_i1
221bp
FPKM:0.00 TPM:0.00
5400 A_BomoBR_DN18769_c0_g1_i1
217bp
FPKM:0.00 TPM:0.00
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