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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3721 A_BomoBR_DN16082_c0_g1_i1
273bp
FPKM:0.00 TPM:0.00
3722 A_BomoBR_DN16083_c0_g1_i1
217bp
FPKM:0.00 TPM:0.00
3723 A_BomoBR_DN16084_c0_g1_i1
274bp
FPKM:0.00 TPM:0.00
3724 A_BomoBR_DN16085_c0_g1_i1
546bp
 uncharacterized_protein_LOC101743972_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3725 A_BomoBR_DN16085_c0_g2_i1
383bp
 uncharacterized_protein_LOC101743972_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3726 A_BomoBR_DN16086_c0_g1_i1
358bp
FPKM:0.00 TPM:0.00
3727 A_BomoBR_DN16087_c0_g1_i1
256bp
FPKM:0.00 TPM:0.00
3728 A_BomoBR_DN16089_c0_g1_i1
304bp
FPKM:0.00 TPM:0.00
3729 A_BomoBR_DN16090_c0_g1_i1
767bp
 cytoplasmic_dynein_2_heavy_chain_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0030030 P cell projection organization
GO:0030286 C dynein complex
GO:0042995 C cell projection
FPKM:0.00 TPM:0.00
3730 A_BomoBR_DN16090_c0_g2_i1
427bp
 cytoplasmic_dynein_2_heavy_chain_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007018 P microtubule-based movement
GO:0007030 P Golgi organization
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008105 P protein localization
GO:0009953 P dorsal/ventral pattern formation
GO:0016020 C membrane
GO:0016485 P protein processing
GO:0016887 F ATP hydrolysis activity
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0021522 P spinal cord motor neuron differentiation
GO:0030030 P cell projection organization
GO:0030182 P neuron differentiation
GO:0030286 C dynein complex
GO:0030326 P embryonic limb morphogenesis
GO:0030900 P forebrain development
GO:0031512 C motile cilium
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0045177 C apical part of cell
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0060271 P cilium assembly
GO:0060976 P coronary vasculature development
GO:0070062 C extracellular exosome
GO:0072372 C cilium
GO:0097542 C ciliary tip
FPKM:0.00 TPM:0.00
3731 A_BomoBR_DN16093_c0_g1_i1
372bp
FPKM:0.00 TPM:0.00
3732 A_BomoBR_DN16093_c0_g2_i1
496bp
FPKM:0.00 TPM:0.00
3733 A_BomoBR_DN16095_c0_g1_i1
227bp
 transposase,_partial_[Hyalophora_cecropia]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.00 TPM:0.00
3734 A_BomoBR_DN16097_c0_g1_i1
434bp
FPKM:0.00 TPM:0.00
3735 A_BomoBR_DN16098_c0_g1_i1
1429bp
 acyl-CoA-binding_domain-containing_protein_6-like_isoform_X1_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0005737 C cytoplasm
GO:0008289 F lipid binding
FPKM:0.00 TPM:0.00
3736 A_BomoBR_DN16098_c0_g1_i2
1884bp
 Acyl-CoA_binding_protein_[Danaus_plexippus_plexippus]
GO:0005737 C cytoplasm
GO:0008168 F methyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0032259 P methylation
FPKM:0.00 TPM:0.00
3737 A_BomoBR_DN16099_c0_g1_i1
245bp
FPKM:0.00 TPM:0.00
3738 A_BomoBR_DN160_c0_g1_i1
419bp
FPKM:0.00 TPM:0.00
3739 A_BomoBR_DN16100_c0_g1_i1
336bp
FPKM:0.00 TPM:0.00
3740 A_BomoBR_DN16100_c0_g2_i1
295bp
FPKM:0.00 TPM:0.00
3741 A_BomoBR_DN16101_c0_g1_i1
492bp
FPKM:0.00 TPM:0.00
3742 A_BomoBR_DN16104_c0_g1_i1
276bp
FPKM:0.00 TPM:0.00
3743 A_BomoBR_DN16107_c0_g1_i1
303bp
FPKM:0.00 TPM:0.00
3744 A_BomoBR_DN16109_c0_g1_i1
315bp
FPKM:0.00 TPM:0.00
3745 A_BomoBR_DN1610_c0_g1_i1
203bp
FPKM:0.00 TPM:0.00
3746 A_BomoBR_DN16110_c0_g1_i1
568bp
 PREDICTED:_uncharacterized_protein_LOC108367278,_partial_[Rhagoletis_zephyria]
FPKM:0.00 TPM:0.00
3747 A_BomoBR_DN16112_c0_g1_i1
665bp
FPKM:0.00 TPM:0.00
3748 A_BomoBR_DN16112_c1_g1_i1
480bp
FPKM:0.00 TPM:0.00
3749 A_BomoBR_DN16113_c0_g1_i1
324bp
FPKM:0.00 TPM:0.00
3750 A_BomoBR_DN16116_c0_g1_i1
204bp
FPKM:0.00 TPM:0.00
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