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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1591 A_BomoBR_DN12834_c0_g1_i1
411bp
FPKM:0.00 TPM:0.00
1592 A_BomoBR_DN12838_c0_g1_i1
920bp
FPKM:0.00 TPM:0.00
1593 A_BomoBR_DN12838_c0_g2_i1
274bp
FPKM:0.00 TPM:0.00
1594 A_BomoBR_DN1283_c0_g1_i1
256bp
FPKM:0.00 TPM:0.00
1595 A_BomoBR_DN12840_c0_g1_i1
1600bp
 extramacrochaetae_protein_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001191 F obsolete transcriptional repressor activity, RNA polymerase II transcription factor binding
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007286 P spermatid development
GO:0007391 P dorsal closure
GO:0007422 P peripheral nervous system development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007460 P R8 cell fate commitment
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007494 P midgut development
GO:0007530 P sex determination
GO:0007541 P sex determination, primary response to X:A ratio
GO:0008258 P head involution
GO:0008283 P cell population proliferation
GO:0008407 P chaeta morphogenesis
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0030381 P chorion-containing eggshell pattern formation
GO:0031987 P locomotion involved in locomotory behavior
GO:0042675 P compound eye cone cell differentiation
GO:0043392 P negative regulation of DNA binding
GO:0045466 P R7 cell differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046331 P lateral inhibition
GO:0046552 P photoreceptor cell fate commitment
GO:0046843 P dorsal appendage formation
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048056 P R3/R4 cell differentiation
GO:0048854 P brain morphogenesis
FPKM:0.00 TPM:0.00
1596 A_BomoBR_DN12842_c0_g1_i1
279bp
 LOW_QUALITY_PROTEIN:_cadherin-related_tumor_suppressor_[Bombyx_mori]
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001736 P establishment of planar polarity
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007164 P establishment of tissue polarity
GO:0007446 P imaginal disc growth
GO:0007447 P imaginal disc pattern formation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0009888 P tissue development
GO:0010629 P negative regulation of gene expression
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016318 P ommatidial rotation
GO:0016324 C apical plasma membrane
GO:0016336 P establishment or maintenance of polarity of larval imaginal disc epithelium
GO:0016337 P cell-cell adhesion
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0018149 P peptide cross-linking
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0032880 P regulation of protein localization
GO:0035159 P regulation of tube length, open tracheal system
GO:0035209 P pupal development
GO:0035220 P wing disc development
GO:0035329 P hippo signaling
GO:0040008 P regulation of growth
GO:0042067 P establishment of ommatidial planar polarity
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045296 F cadherin binding
GO:0045317 P equator specification
GO:0045570 P regulation of imaginal disc growth
GO:0045571 P negative regulation of imaginal disc growth
GO:0045926 P negative regulation of growth
GO:0046620 P regulation of organ growth
GO:0048105 P establishment of body hair planar orientation
GO:0050839 F cell adhesion molecule binding
GO:0090176 P microtubule cytoskeleton organization involved in establishment of planar polarity
FPKM:0.00 TPM:0.00
1597 A_BomoBR_DN12842_c0_g2_i1
490bp
 LOW_QUALITY_PROTEIN:_cadherin-related_tumor_suppressor_[Bombyx_mori]
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001736 P establishment of planar polarity
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007164 P establishment of tissue polarity
GO:0007446 P imaginal disc growth
GO:0007447 P imaginal disc pattern formation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0009888 P tissue development
GO:0010629 P negative regulation of gene expression
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016318 P ommatidial rotation
GO:0016324 C apical plasma membrane
GO:0016336 P establishment or maintenance of polarity of larval imaginal disc epithelium
GO:0016337 P cell-cell adhesion
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0018149 P peptide cross-linking
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0032880 P regulation of protein localization
GO:0035159 P regulation of tube length, open tracheal system
GO:0035209 P pupal development
GO:0035220 P wing disc development
GO:0035329 P hippo signaling
GO:0040008 P regulation of growth
GO:0042067 P establishment of ommatidial planar polarity
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045296 F cadherin binding
GO:0045317 P equator specification
GO:0045570 P regulation of imaginal disc growth
GO:0045571 P negative regulation of imaginal disc growth
GO:0045926 P negative regulation of growth
GO:0046620 P regulation of organ growth
GO:0048105 P establishment of body hair planar orientation
GO:0050839 F cell adhesion molecule binding
GO:0090176 P microtubule cytoskeleton organization involved in establishment of planar polarity
FPKM:0.00 TPM:0.00
1598 A_BomoBR_DN12843_c0_g1_i1
354bp
FPKM:0.00 TPM:0.00
1599 A_BomoBR_DN12845_c0_g1_i1
705bp
FPKM:0.00 TPM:0.00
1600 A_BomoBR_DN12847_c0_g1_i1
1261bp
 uncharacterized_protein_LOC101744306_isoform_X6_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1601 A_BomoBR_DN12848_c0_g1_i1
248bp
FPKM:0.00 TPM:0.00
1602 A_BomoBR_DN12848_c0_g2_i1
640bp
FPKM:0.00 TPM:0.00
1603 A_BomoBR_DN12851_c0_g1_i1
467bp
 IGF-like_peptide_precursor_[Bombyx_mori]
GO:0005179 F hormone activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
FPKM:0.00 TPM:0.00
1604 A_BomoBR_DN12852_c0_g1_i1
698bp
FPKM:0.00 TPM:0.00
1605 A_BomoBR_DN12853_c0_g1_i1
228bp
FPKM:0.00 TPM:0.00
1606 A_BomoBR_DN12854_c0_g1_i1
329bp
 _putative_cuticle_protein_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1607 A_BomoBR_DN12854_c0_g2_i1
764bp
 protein_lethal(3)malignant_blood_neoplasm_1_isoform_X2_[Bombyx_mori]
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0008010 F structural constituent of chitin-based larval cuticle
GO:0022416 P chaeta development
GO:0031012 C extracellular matrix
GO:0035220 P wing disc development
GO:0040003 P chitin-based cuticle development
GO:0042302 F structural constituent of cuticle
GO:0042387 P plasmatocyte differentiation
GO:0048471 C perinuclear region of cytoplasm
FPKM:0.00 TPM:0.00
1608 A_BomoBR_DN12856_c0_g1_i1
1555bp
 ubiquitin_carboxyl-terminal_hydrolase_34_[Bombyx_mori]
GO:0000124 C SAGA complex
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016055 P Wnt signaling pathway
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0071108 P protein K48-linked deubiquitination
GO:0090263 P positive regulation of canonical Wnt signaling pathway
FPKM:0.00 TPM:0.00
1609 A_BomoBR_DN12859_c0_g1_i1
279bp
FPKM:0.00 TPM:0.00
1610 A_BomoBR_DN12860_c0_g1_i1
289bp
FPKM:0.00 TPM:0.00
1611 A_BomoBR_DN12861_c0_g1_i1
204bp
FPKM:0.00 TPM:0.00
1612 A_BomoBR_DN12865_c0_g1_i1
238bp
FPKM:0.00 TPM:0.00
1613 A_BomoBR_DN12866_c0_g1_i1
290bp
FPKM:0.00 TPM:0.00
1614 A_BomoBR_DN12867_c0_g1_i1
235bp
FPKM:0.00 TPM:0.00
1615 A_BomoBR_DN12868_c0_g1_i1
222bp
FPKM:0.00 TPM:0.00
1616 A_BomoBR_DN12869_c0_g1_i1
633bp
FPKM:0.00 TPM:0.00
1617 A_BomoBR_DN12870_c0_g1_i1
458bp
FPKM:0.00 TPM:0.00
1618 A_BomoBR_DN12871_c0_g1_i1
255bp
FPKM:0.00 TPM:0.00
1619 A_BomoBR_DN12872_c0_g1_i1
555bp
FPKM:0.00 TPM:0.00
1620 A_BomoBR_DN12875_c0_g1_i1
1742bp
 dolichyl-diphosphooligosaccharide--protein_glycosyltransferase_subunit_1_[Bombyx_mori]
GO:0004579 F dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0042470 C melanosome
FPKM:0.00 TPM:0.00
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