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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1231 A_BomoOtmSK_comp10445_c1_seq1
236bp
FPKM:2.18 TPM:2.35
1232 A_BomoOtmSK_comp1044639_c0_seq1
209bp
 aminopeptidase_N_precursor_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0031225 C anchored component of membrane
GO:0046872 F metal ion binding
FPKM:2.34 TPM:2.52
1233 A_BomoOtmSK_comp1044756_c0_seq1
379bp
 uncharacterized_protein_LOC101744482_[Bombyx_mori]
FPKM:0.66 TPM:0.71
1234 A_BomoOtmSK_comp10448_c0_seq1
320bp
 uncharacterized_protein_LOC110386707_[Bombyx_mori]
FPKM:3.11 TPM:3.35
1235 A_BomoOtmSK_comp10448_c1_seq1
210bp
 uncharacterized_protein_LOC110386707_[Bombyx_mori]
FPKM:1.14 TPM:1.23
1236 A_BomoOtmSK_comp1044905_c0_seq1
289bp
FPKM:0.40 TPM:0.43
1237 A_BomoOtmSK_comp1044945_c0_seq1
216bp
FPKM:1.02 TPM:1.10
1238 A_BomoOtmSK_comp1044952_c0_seq1
293bp
FPKM:1.15 TPM:1.24
1239 A_BomoOtmSK_comp10449_c0_seq1
1732bp
 E3_SUMO-protein_ligase_EGR2_isoform_X2_[Helicoverpa_armigera]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.21 TPM:2.39
1240 A_BomoOtmSK_comp10449_c0_seq2
2017bp
 E3_SUMO-protein_ligase_EGR2_isoform_X2_[Helicoverpa_armigera]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:3.17 TPM:3.42
1241 A_BomoOtmSK_comp1044_c0_seq1
219bp
 actin_cytoskeleton-regulatory_complex_protein_pan1,_partial_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1242 A_BomoOtmSK_comp1045015_c0_seq1
202bp
FPKM:2.72 TPM:2.94
1243 A_BomoOtmSK_comp1045095_c0_seq1
277bp
FPKM:0.89 TPM:0.96
1244 A_BomoOtmSK_comp10450_c0_seq1
1362bp
 WD_repeat-containing_protein_46_[Bombyx_mori]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0030686 C 90S preribosome
GO:0032040 C small-subunit processome
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
FPKM:6.38 TPM:6.87
1245 A_BomoOtmSK_comp10450_c0_seq2
634bp
 WD_repeat-containing_protein_46_[Bombyx_mori]
FPKM:4.01 TPM:4.33
1246 A_BomoOtmSK_comp1045164_c0_seq1
252bp
FPKM:1.17 TPM:1.26
1247 A_BomoOtmSK_comp1045195_c0_seq1
360bp
FPKM:0.97 TPM:1.04
1248 A_BomoOtmSK_comp10451_c0_seq1
856bp
 mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
FPKM:1.95 TPM:2.10
1249 A_BomoOtmSK_comp10451_c0_seq2
862bp
 mediator_of_RNA_polymerase_2_transcription_subunit_13_like_protein_[Danaus_plexippus_plexippus]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
FPKM:3.73 TPM:4.02
1250 A_BomoOtmSK_comp1045200_c0_seq1
322bp
FPKM:0.61 TPM:0.66
1251 A_BomoOtmSK_comp1045245_c0_seq1
292bp
FPKM:1.16 TPM:1.25
1252 A_BomoOtmSK_comp1045270_c0_seq1
247bp
FPKM:1.87 TPM:2.02
1253 A_BomoOtmSK_comp10452_c0_seq1
446bp
 von_Willebrand_factor_A_domain-containing_protein_9_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1254 A_BomoOtmSK_comp10452_c0_seq2
1762bp
 von_Willebrand_factor_A_domain-containing_protein_9_[Bombyx_mori]
FPKM:5.31 TPM:5.72
1255 A_BomoOtmSK_comp1045366_c0_seq1
206bp
 Mariner_Mos1_transposase_[Acromyrmex_echinatior]
FPKM:2.49 TPM:2.69
1256 A_BomoOtmSK_comp10453_c0_seq1
740bp
 uncharacterized_protein_LOC105842707_[Bombyx_mori]
FPKM:1.47 TPM:1.59
1257 A_BomoOtmSK_comp10453_c1_seq1
342bp
 uncharacterized_protein_LOC110384861_[Bombyx_mori]
FPKM:1.07 TPM:1.16
1258 A_BomoOtmSK_comp1045455_c0_seq1
201bp
FPKM:2.79 TPM:3.00
1259 A_BomoOtmSK_comp104547_c0_seq1
2797bp
 Noki_protein_[Operophtera_brumata]
GO:0004860 F protein kinase inhibitor activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006469 P negative regulation of protein kinase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019221 P cytokine-mediated signaling pathway
GO:0030054 C cell junction
GO:0042734 C presynaptic membrane
GO:0044300 C cerebellar mossy fiber
GO:0045202 C synapse
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0051965 P positive regulation of synapse assembly
FPKM:3.26 TPM:3.51
1260 A_BomoOtmSK_comp1045483_c0_seq1
207bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101740701_[Bombyx_mori]
FPKM:2.44 TPM:2.63
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