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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
841 A_BomaASG_c11362_g1_i1
201bp
FPKM:6.40 TPM:5.01
842 A_BomaASG_c11364_g1_i1
544bp
FPKM:0.70 TPM:0.55
843 A_BomaASG_c11366_g1_i1
254bp
protein_tramtrack,_beta_isoform-like_isoform_X3_[Helicoverpa_armigera]
FPKM:1.63 TPM:1.27
844 A_BomaASG_c11367_g1_i1
246bp
FPKM:2.35 TPM:1.84
845 A_BomaASG_c11369_g1_i1
279bp
FPKM:1.75 TPM:1.37
846 A_BomaASG_c1136_g1_i1
258bp
FPKM:1.05 TPM:0.82
847 A_BomaASG_c11371_g1_i1
311bp
FPKM:1.04 TPM:0.82
848 A_BomaASG_c11372_g1_i1
308bp
FPKM:3.55 TPM:2.78
849 A_BomaASG_c11375_g1_i1
446bp
FPKM:4.87 TPM:3.81
850 A_BomaASG_c11376_g1_i1
225bp
palmitoyltransferase_ZDHHC3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005794 C Golgi apparatus
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016409 F palmitoyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018230 P peptidyl-L-cysteine S-palmitoylation
GO:0018345 P protein palmitoylation
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
FPKM:5.99 TPM:4.68
851 A_BomaASG_c11377_g1_i1
429bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.39 TPM:1.09
852 A_BomaASG_c11378_g1_i1
235bp
FPKM:2.65 TPM:2.07
853 A_BomaASG_c1137_g1_i1
240bp
FPKM:3.13 TPM:2.45
854 A_BomaASG_c11380_g1_i1
254bp
FPKM:2.17 TPM:1.70
855 A_BomaASG_c11386_g1_i1
385bp
probable_cleavage_and_polyadenylation_specificity_factor_subunit_2_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0006398 P mRNA 3'-end processing by stem-loop binding and cleavage
GO:0022008 P neurogenesis
FPKM:2.60 TPM:2.04
856 A_BomaASG_c11389_g1_i1
210bp
FPKM:1.84 TPM:1.44
857 A_BomaASG_c11390_g1_i1
208bp
FPKM:0.95 TPM:0.74
858 A_BomaASG_c11392_g1_i1
423bp
FPKM:0.81 TPM:0.64
859 A_BomaASG_c11393_g1_i1
202bp
FPKM:2.10 TPM:1.64
860 A_BomaASG_c11395_g1_i1
285bp
retroelement_polyprotein_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:3.34 TPM:2.61
861 A_BomaASG_c11397_g1_i1
505bp
FPKM:1.09 TPM:0.85
862 A_BomaASG_c11397_g1_i2
325bp
FPKM:0.00 TPM:0.00
863 A_BomaASG_c11398_g1_i1
345bp
LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
FPKM:1.15 TPM:0.90
864 A_BomaASG_c11399_g1_i1
228bp
FPKM:5.04 TPM:3.95
865 A_BomaASG_c113_g1_i1
298bp
FPKM:0.76 TPM:0.59
866 A_BomaASG_c11402_g1_i1
1030bp
NADH_dehydrogenase_[ubiquinone]_iron-sulfur_protein_3,_mitochondrial_[Bombyx_mori]
GO:0003954 F NADH dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0030308 P negative regulation of cell growth
GO:0031966 C mitochondrial membrane
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
GO:0072593 P reactive oxygen species metabolic process
GO:2001243 P negative regulation of intrinsic apoptotic signaling pathway
FPKM:118.30 TPM:92.57
867 A_BomaASG_c11403_g1_i1
457bp
FPKM:1.80 TPM:1.41
868 A_BomaASG_c11404_g1_i1
233bp
FPKM:4.07 TPM:3.19
869 A_BomaASG_c11406_g1_i1
267bp
FPKM:5.30 TPM:4.15
870 A_BomaASG_c11407_g1_i1
204bp
FPKM:4.06 TPM:3.17
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