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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
481 A_BomaASG_c10726_g1_i1
241bp
hypothetical_protein_RR46_03808_[Papilio_xuthus]
FPKM:3.72 TPM:2.91
482 A_BomaASG_c10729_g1_i1
210bp
FPKM:4.61 TPM:3.61
483 A_BomaASG_c1072_g1_i1
245bp
FPKM:1.78 TPM:1.39
484 A_BomaASG_c10732_g1_i1
225bp
FPKM:2.99 TPM:2.34
485 A_BomaASG_c10734_g1_i1
257bp
FPKM:4.22 TPM:3.30
486 A_BomaASG_c10739_g1_i1
364bp
FPKM:2.60 TPM:2.04
487 A_BomaASG_c1073_g1_i1
210bp
PREDICTED:_uncharacterized_protein_LOC107219259,_partial_[Neodiprion_lecontei]
FPKM:1.84 TPM:1.44
488 A_BomaASG_c10741_g1_i1
339bp
FPKM:0.89 TPM:0.69
489 A_BomaASG_c10746_g1_i1
205bp
FPKM:2.00 TPM:1.56
490 A_BomaASG_c1074_g1_i1
424bp
FPKM:4.05 TPM:3.17
491 A_BomaASG_c10751_g1_i1
218bp
FPKM:0.82 TPM:0.64
492 A_BomaASG_c10752_g1_i1
368bp
FPKM:0.26 TPM:0.20
493 A_BomaASG_c10753_g1_i1
215bp
FPKM:0.00 TPM:0.00
494 A_BomaASG_c10754_g1_i1
346bp
FPKM:5.41 TPM:4.23
495 A_BomaASG_c10755_g1_i1
297bp
FPKM:3.82 TPM:2.99
496 A_BomaASG_c10756_g1_i1
213bp
FPKM:1.76 TPM:1.38
497 A_BomaASG_c1075_g1_i1
219bp
FPKM:10.53 TPM:8.24
498 A_BomaASG_c10763_g1_i1
3895bp
A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_1_precursor_[Bombyx_mori]
GO:0004175 F endopeptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008201 F heparin binding
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0010573 P vascular endothelial growth factor production
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030199 P collagen fibril organization
GO:0030574 P collagen catabolic process
GO:0031012 C extracellular matrix
GO:0032964 P collagen biosynthetic process
GO:0043206 P supramolecular fiber organization
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1900748 P positive regulation of vascular endothelial growth factor signaling pathway
FPKM:79.72 TPM:62.38
499 A_BomaASG_c10765_g1_i1
373bp
FPKM:2.25 TPM:1.76
500 A_BomaASG_c10766_g1_i1
267bp
ribonucleases_P/MRP_protein_subunit_POP1_[Bombyx_mori]
GO:0000171 F ribonuclease MRP activity
GO:0000172 C ribonuclease MRP complex
GO:0001682 P tRNA 5'-leader removal
GO:0004526 F ribonuclease P activity
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005655 C nucleolar ribonuclease P complex
GO:0005730 C nucleolus
GO:0006396 P RNA processing
GO:0008033 P tRNA processing
GO:0016078 P tRNA catabolic process
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:3.37 TPM:2.64
501 A_BomaASG_c10767_g1_i1
228bp
FPKM:0.72 TPM:0.56
502 A_BomaASG_c10770_g1_i1
203bp
FPKM:3.09 TPM:2.42
503 A_BomaASG_c10771_g1_i1
294bp
FPKM:0.78 TPM:0.61
504 A_BomaASG_c10772_g1_i1
341bp
FPKM:2.92 TPM:2.29
505 A_BomaASG_c10773_g1_i1
255bp
FPKM:4.30 TPM:3.37
506 A_BomaASG_c10774_g1_i1
270bp
FPKM:3.76 TPM:2.94
507 A_BomaASG_c10776_g1_i1
331bp
transposase,_partial_[Antheraea_yamamai]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:1.24 TPM:0.97
508 A_BomaASG_c10778_g1_i1
362bp
FPKM:5.78 TPM:4.53
509 A_BomaASG_c10779_g1_i1
311bp
FPKM:3.13 TPM:2.45
510 A_BomaASG_c10782_g1_i1
322bp
hypothetical_protein_M569_00248,_partial_[Genlisea_aurea]
FPKM:2.28 TPM:1.78
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